Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1913 |
Symbol | |
ID | 4687523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2035897 |
End bp | 2036622 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639834922 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_982144 |
Protein GI | 121604815 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.205993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.953786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATC CTATTCTTAC GATAGACGAA AGAGTGGCCA TCAACAGCGG CCGCTGGTTC TCCTCCCTTT CACCTTCCCT GAGGCACGAC ATCCTCCGAT GCGCTTACGT CAAACGCTAC AAAGACGGCG ACCTCATTGC GGCGCGCGGC GACCCGCCCG AAGAGTGGAT TGCCTGCGCC ACCGGCGCGG TGCGCGTCAG TTCGACCTCG ATTTCCGGCA AGCTGGTGAC GCTGACCTAT GTGGAGCCCG GCATCTGGTT TGGCGATGTG GCGATTTTCG ACGGCGACCG CCGCACCCAC GATGCCTATG CCCACGGCAG CACCACCACG CTGTGCGTGG CGCGTGGCGA CCTGCGAAAA ATCCTGAGCC TGCATGTCGA GCTGTACGAA GCGCTGCTGC GCCTGCATGC ACGCCGCATC CGCCAGCTGT TCGGCCTGGT CGAAGACCTC AACACGCTGC CGCTGCGGGC GCGGCTGGCC AAGCAGCTGC TGCACCTGGT GCGCAGCTAC GGCGTTCCCA GCCTGTCCAA TGGCAGCGAT ATCCGCATCA GCCTGCAACT GGCGCAGGAA GAACTGGCGC AGCTCCTGGG CGCCTCGCGC CAGCGGGTCA ACCAGGAACT CAAGGCGATG GAGCGCGAGG AAGCCATCCG CATCGAGCCG GGCGGCCTGG TGGTGCGCAA CCGCCAAACG CTGATGCGTA TCTCTGAAGC GGATGCCGAC AAATAA
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Protein sequence | MDDPILTIDE RVAINSGRWF SSLSPSLRHD ILRCAYVKRY KDGDLIAARG DPPEEWIACA TGAVRVSSTS ISGKLVTLTY VEPGIWFGDV AIFDGDRRTH DAYAHGSTTT LCVARGDLRK ILSLHVELYE ALLRLHARRI RQLFGLVEDL NTLPLRARLA KQLLHLVRSY GVPSLSNGSD IRISLQLAQE ELAQLLGASR QRVNQELKAM EREEAIRIEP GGLVVRNRQT LMRISEADAD K
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