More than 300 homologs were found in PanDaTox collection
for query gene Nwi_0675 on replicon NC_007406
Organism: Nitrobacter winogradskyi Nb-255



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007406  Nwi_0675  cyclic nucleotide-binding protein  100 
 
 
240 aa  491  9.999999999999999e-139  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.35129  normal  0.370797 
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  69.23 
 
 
281 aa  350  1e-95  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  59.83 
 
 
254 aa  298  7e-80  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  59.83 
 
 
254 aa  296  1e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  59.83 
 
 
254 aa  294  9e-79  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_007778  RPB_1475  Crp/FNR family transcriptional regulator  47.41 
 
 
260 aa  214  8e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.796858 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  44.44 
 
 
256 aa  211  9e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2083  CRP/FNR family transcriptional regulator  46.32 
 
 
258 aa  207  8e-53  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.193038 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  45.54 
 
 
260 aa  206  3e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  43.53 
 
 
251 aa  202  4e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1486  Crp/FNR family transcriptional regulator  35.71 
 
 
240 aa  103  3e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  27.41 
 
 
236 aa  91.7  9e-18  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.77 
 
 
247 aa  91.7  1e-17  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  28.49 
 
 
236 aa  91.3  1e-17  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  30.15 
 
 
235 aa  90.5  2e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  23.21 
 
 
229 aa  88.2  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  26.04 
 
 
225 aa  85.5  7e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.27 
 
 
239 aa  84.7  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  27.03 
 
 
222 aa  85.1  0.000000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  24.76 
 
 
227 aa  84.3  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.52 
 
 
229 aa  84  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.97 
 
 
236 aa  83.6  0.000000000000002  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.51 
 
 
231 aa  83.6  0.000000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  26.97 
 
 
236 aa  83.6  0.000000000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.32 
 
 
228 aa  82.8  0.000000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  25.93 
 
 
227 aa  82  0.000000000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5811  Crp/FNR family transcriptional regulator  26.78 
 
 
266 aa  81.6  0.000000000000009  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  23.32 
 
 
236 aa  81.6  0.000000000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  24.21 
 
 
225 aa  80.9  0.00000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  24.19 
 
 
232 aa  80.9  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_007511  Bcep18194_B1665  Crp/FNR family transcriptional regulator  27.96 
 
 
259 aa  79.7  0.00000000000003  Burkholderia sp. 383  Bacteria  hitchhiker  0.00239618  normal  0.130389 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  25.93 
 
 
224 aa  78.6  0.00000000000009  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  25.74 
 
 
228 aa  78.2  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  27.15 
 
 
223 aa  78.2  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5999  Crp/FNR family transcriptional regulator  26.67 
 
 
259 aa  78.2  0.0000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.582695  normal 
 
 
-
 
NC_008061  Bcen_4012  Crp/FNR family transcriptional regulator  26.67 
 
 
259 aa  78.2  0.0000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  26.37 
 
 
232 aa  77.8  0.0000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4355  Crp/FNR family transcriptional regulator  26.67 
 
 
259 aa  78.2  0.0000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0811079  normal 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  25.56 
 
 
261 aa  77.4  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  25.56 
 
 
261 aa  77.4  0.0000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3764  Crp/FNR family transcriptional regulator  27.42 
 
 
259 aa  77  0.0000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0549839 
 
 
-
 
NC_010552  BamMC406_4238  Crp/FNR family transcriptional regulator  27.42 
 
 
257 aa  76.6  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0460631  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  27.89 
 
 
234 aa  76.6  0.0000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  25.26 
 
 
228 aa  76.3  0.0000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011004  Rpal_4909  transcriptional regulator, Crp/Fnr family  25 
 
 
221 aa  75.9  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.385812  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  24.11 
 
 
352 aa  75.9  0.0000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  27.96 
 
 
234 aa  75.9  0.0000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  23.83 
 
 
229 aa  75.9  0.0000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  24.59 
 
 
248 aa  75.9  0.0000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  29.72 
 
 
227 aa  75.5  0.0000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  27.86 
 
 
225 aa  75.5  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_008784  BMASAVP1_1334  Crp/FNR family transcriptional regulator  27.42 
 
 
242 aa  75.5  0.0000000000007  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0190  Crp/FNR family transcriptional regulator  27.42 
 
 
242 aa  75.5  0.0000000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0460  Crp/FNR family transcriptional regulator  27.42 
 
 
260 aa  75.5  0.0000000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.81 
 
 
226 aa  75.1  0.0000000000008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2604  Crp/Fnr family transcriptional regulator  27.42 
 
 
260 aa  75.1  0.0000000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2747  Crp/Fnr family transcriptional regulator  27.42 
 
 
260 aa  75.1  0.0000000000009  Burkholderia pseudomallei 668  Bacteria  normal  0.225266  n/a   
 
 
-
 
NC_006349  BMAA0164  Crp/FNR family transcriptional regulator  27.42 
 
 
260 aa  75.1  0.0000000000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1016  Crp/FNR family transcriptional regulator  27.42 
 
 
260 aa  75.1  0.0000000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.11 
 
 
228 aa  75.1  0.0000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  27.84 
 
 
222 aa  74.7  0.000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  22.84 
 
 
253 aa  74.7  0.000000000001  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  22.05 
 
 
234 aa  75.1  0.000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4272  transcriptional regulator, Crp/Fnr family  26.8 
 
 
218 aa  73.9  0.000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.71016  normal  0.563993 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  27.72 
 
 
229 aa  74.3  0.000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  27.62 
 
 
224 aa  74.3  0.000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  25.54 
 
 
237 aa  74.3  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  22.68 
 
 
229 aa  73.9  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28.25 
 
 
251 aa  73.6  0.000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  25.84 
 
 
224 aa  72.8  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3075  Crp/FNR family transcriptional regulator  26.87 
 
 
239 aa  72.8  0.000000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.193734 
 
 
-
 
NC_007435  BURPS1710b_A0129  Crp/FNR family transcriptional regulator  26.88 
 
 
259 aa  72.8  0.000000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_009075  BURPS668_A1636  Crp/FNR family transcriptional regulator  26.88 
 
 
259 aa  72.8  0.000000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  24.74 
 
 
236 aa  72.4  0.000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  25 
 
 
234 aa  72.4  0.000000000005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1554  Crp/FNR family transcriptional regulator  26.88 
 
 
259 aa  72.8  0.000000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.796955  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  24.86 
 
 
231 aa  72.8  0.000000000005  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  22.01 
 
 
226 aa  72.4  0.000000000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_010086  Bmul_4265  Crp/FNR family transcriptional regulator  25.13 
 
 
259 aa  72.4  0.000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.367581  normal  0.892156 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  23.4 
 
 
241 aa  72.4  0.000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  25.24 
 
 
226 aa  72  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  23.96 
 
 
248 aa  72  0.000000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.000000000009  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  25.56 
 
 
354 aa  71.2  0.00000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  26.01 
 
 
214 aa  71.2  0.00000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  23.53 
 
 
244 aa  71.6  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  23.96 
 
 
251 aa  71.6  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1779  Crp/FNR family transcriptional regulator  26.34 
 
 
239 aa  71.2  0.00000000001  Acidovorax sp. JS42  Bacteria  normal  0.72161  normal 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  22.99 
 
 
239 aa  71.2  0.00000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_008391  Bamb_3812  Crp/FNR family transcriptional regulator  26.67 
 
 
257 aa  71.6  0.00000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.279241  normal  0.577974 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  26.98 
 
 
217 aa  70.9  0.00000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  22.99 
 
 
244 aa  70.5  0.00000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  24.1 
 
 
225 aa  70.9  0.00000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  26.47 
 
 
220 aa  70.5  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  24.1 
 
 
225 aa  70.5  0.00000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
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