Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3616 |
Symbol | |
ID | 4244133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 5559755 |
End bp | 5560525 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638108571 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_723160 |
Protein GI | 113477099 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0729234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTAT CTTCACATCC AGACCTACCA GAAATGTCAC TAAATGTACA AAATACTAAT ACTTCTGCTC TGAACAACAG GCCATTTTTG ACTTGGCAAC TAATCATAGA TTGGGCAGAA GAACACTACC GTAGTAGAGC TTTCAGCAAA GATGAACGTA TTCCCGCTCG CCCAGGTTTG CTGTATCTAA TACAGAAAGG AGCAATTCGT CTGGTAGGTA ATGCCAACAT AAGTGCCAAT CGAAATGTTA GTAATAATAA CCTTAGCAAA TCAAAAACAA GTCCAAATTC AGATGAACCT TTTCTAGGAT TAGTTGGTGC TGGTCAACCA TTTGAACTAA TAGCTCAGTC ACCATTTACG CTACAAGCTT ATGCTCATAT CGATAAAACA ACTGTACTTT GGATGTATTG GCATGAACTG GATAACTGGC CTCACTTCCG CAGAGAAGTT TTAGACGCTT TTCGCTATCA ACATCAAAGG AAGCTTTTGT GGCTAAGTAC TCTGGGTCAA CGTCGTACTA TTGATCGATT ATTTGGATTT CTCACACTAT TAATTGAAGA ATATGGGCAA CCCTGGACTA GTCAAGATAA CCTAGAAGTA ACAAGTGGTT ATTATCTACC TTGGCCTTTG ACTCATACTC AAATTGGTAG CGCTATTGGT TCTACCCGTG TAACTGTGAC TCGTCTCATA GGTAAATTAC GTCAGCAAGG CTTAGTTTAT ATTCAGAATG ATAATCTTAT TTGTTTGCCA ATGGAATCTC AAAACCAATA A
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Protein sequence | MQLSSHPDLP EMSLNVQNTN TSALNNRPFL TWQLIIDWAE EHYRSRAFSK DERIPARPGL LYLIQKGAIR LVGNANISAN RNVSNNNLSK SKTSPNSDEP FLGLVGAGQP FELIAQSPFT LQAYAHIDKT TVLWMYWHEL DNWPHFRREV LDAFRYQHQR KLLWLSTLGQ RRTIDRLFGF LTLLIEEYGQ PWTSQDNLEV TSGYYLPWPL THTQIGSAIG STRVTVTRLI GKLRQQGLVY IQNDNLICLP MESQNQ
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