Gene Tery_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3616 
Symbol 
ID4244133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5559755 
End bp5560525 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content39% 
IMG OID638108571 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_723160 
Protein GI113477099 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0729234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTAT CTTCACATCC AGACCTACCA GAAATGTCAC TAAATGTACA AAATACTAAT 
ACTTCTGCTC TGAACAACAG GCCATTTTTG ACTTGGCAAC TAATCATAGA TTGGGCAGAA
GAACACTACC GTAGTAGAGC TTTCAGCAAA GATGAACGTA TTCCCGCTCG CCCAGGTTTG
CTGTATCTAA TACAGAAAGG AGCAATTCGT CTGGTAGGTA ATGCCAACAT AAGTGCCAAT
CGAAATGTTA GTAATAATAA CCTTAGCAAA TCAAAAACAA GTCCAAATTC AGATGAACCT
TTTCTAGGAT TAGTTGGTGC TGGTCAACCA TTTGAACTAA TAGCTCAGTC ACCATTTACG
CTACAAGCTT ATGCTCATAT CGATAAAACA ACTGTACTTT GGATGTATTG GCATGAACTG
GATAACTGGC CTCACTTCCG CAGAGAAGTT TTAGACGCTT TTCGCTATCA ACATCAAAGG
AAGCTTTTGT GGCTAAGTAC TCTGGGTCAA CGTCGTACTA TTGATCGATT ATTTGGATTT
CTCACACTAT TAATTGAAGA ATATGGGCAA CCCTGGACTA GTCAAGATAA CCTAGAAGTA
ACAAGTGGTT ATTATCTACC TTGGCCTTTG ACTCATACTC AAATTGGTAG CGCTATTGGT
TCTACCCGTG TAACTGTGAC TCGTCTCATA GGTAAATTAC GTCAGCAAGG CTTAGTTTAT
ATTCAGAATG ATAATCTTAT TTGTTTGCCA ATGGAATCTC AAAACCAATA A
 
Protein sequence
MQLSSHPDLP EMSLNVQNTN TSALNNRPFL TWQLIIDWAE EHYRSRAFSK DERIPARPGL 
LYLIQKGAIR LVGNANISAN RNVSNNNLSK SKTSPNSDEP FLGLVGAGQP FELIAQSPFT
LQAYAHIDKT TVLWMYWHEL DNWPHFRREV LDAFRYQHQR KLLWLSTLGQ RRTIDRLFGF
LTLLIEEYGQ PWTSQDNLEV TSGYYLPWPL THTQIGSAIG STRVTVTRLI GKLRQQGLVY
IQNDNLICLP MESQNQ