Gene Syncc9902_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1998 
Symbol 
ID3743720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1904029 
End bp1904652 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID637772194 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_377999 
Protein GI78185565 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00839318 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATAA GCACAAACGA AAATGAACGC AAGGGGCCGC TCAAGCCATG CTCACTACAA 
GCAGGGCAGA GGCTCATACT CACCAAGCCA ATTCACAACT GGCCAACAAC AATCGTTGCC
ACGCAAGGAA TAATCCGATT ATCGACCGTT GAAAATGAAA GCCATCCAGA AATCACAGTG
GCGCTTATGT CGTCGTTAGA CGACTGCAAG TTCTGCCATC CCGGCTCAGA GAATCTACAA
ATCGAAGCCA TAACAGACTG CATCATCAAG ATCAACAATG AACAAAAAGT CCATGCTGCT
AACGATGACT TTCTCCAGGA ATGGATTTTT AGACTGTATA CAGTAAGACA TCCGATCAAG
TCAGAAGATC GGCTTAAGTC TTTACTCCAG CTTTTAATTA TCAGGCTTGG CAAACGAACG
CCAGAAGGTT ACAAGCTTCA ATTTTTACTA TCTCATTCTC GACTCGCAGA GATGATTGGT
ACGACAAGGT CAACAGTGAG CCGGTCGCTC GGAGCACTTA AGGACAAGGG AATTATTTCA
ATCGATGAAA TGAAAGAAGA ACTCGTCGTC AGAGATTCAG AACTAATCCC GACCACAGCG
ACAAGAGTTA CCCTTCCACT TTGA
 
Protein sequence
MAISTNENER KGPLKPCSLQ AGQRLILTKP IHNWPTTIVA TQGIIRLSTV ENESHPEITV 
ALMSSLDDCK FCHPGSENLQ IEAITDCIIK INNEQKVHAA NDDFLQEWIF RLYTVRHPIK
SEDRLKSLLQ LLIIRLGKRT PEGYKLQFLL SHSRLAEMIG TTRSTVSRSL GALKDKGIIS
IDEMKEELVV RDSELIPTTA TRVTLPL