| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1666 |
|---|
| Symbol | |
|---|
| ID | 1183303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1833875 |
|---|
| End bp | 1834627 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637393038 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | NP_791491 |
|---|
| Protein GI | 28868872 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0506299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC ATCTGGCAGC CATCAACGGT TTGCGTCTCA AGGCAGAGTG CTCCAATTGC
GGTGTTCGAG AGCTGTGCCT TTCAGTCGGC ATGAGCCTCA CAGACACTGA TCGCTTGTCC
GCAATCATTC CTCAGCCAAT CAAGGTGAAG AAAGGCGCAG CGCTTTACCA CGCTGGCGAT
CCATTGCAAT CGCTGTATGC GGTGCGGTTC GGTTTTTTCA AAACGACGAT CTCTTCGCAG
GACGGGCGCG ACCAGCTGAC CGGGTTTCAG ATGTCGGGGG AATTGCTGGG CTGTGACGCC
ATCAGCAACG ACTGCCACGT GTGCGATGCC ATTGCGCTGG AAGACAGCGA AGTGTGCCCC
ATTCGTTTCA CCCATCTGGA ACGACTGTCG CGAGAAATGC CGTCACTGCA ACACAACCTC
AATCGCGCAT TGAGCAAAGA GATCGTTCGC GACCATGAGA TGTTGCTGCT GCTGGGCAAC
CTCAATGCAG AAGAACGCAT GGCCGCCTTC CTGCTCAACC TGTCTGGCCG GATGTTCAAC
CGGGGCTATT CAGCCACAGC GTTTGTGTTG CGCATGACCC GTGAAGACAT CGGCTCCTAC
CTTGGGCTAC GGCTTGAAAC CATCTGCCGC GCCATCGCCA ACCTGCGCAA TTTGCGCATC
GTCAGCATTT CCGGACGCCA AGTGGAGATC CTCGACCTCA ACCGCCTGCA GGCATTGATC
CACGGGTGCA GCTACCGCGC AAAAAGCCTG TGA
|
|---|
| Protein sequence | MTAHLAAING LRLKAECSNC GVRELCLSVG MSLTDTDRLS AIIPQPIKVK KGAALYHAGD
PLQSLYAVRF GFFKTTISSQ DGRDQLTGFQ MSGELLGCDA ISNDCHVCDA IALEDSEVCP
IRFTHLERLS REMPSLQHNL NRALSKEIVR DHEMLLLLGN LNAEERMAAF LLNLSGRMFN
RGYSATAFVL RMTREDIGSY LGLRLETICR AIANLRNLRI VSISGRQVEI LDLNRLQALI
HGCSYRAKSL
|
|---|
| |