Gene BamMC406_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3149 
Symbol 
ID6180834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp49571 
End bp50320 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content66% 
IMG OID641682925 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001809839 
Protein GI172062188 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC CCGTCGCCAC ACGCCCCGCG GCCCCGTTCC ATGCAGGCAG CCGGGCGGCT 
CCCCGCCAGG CCCCGCACTG CTCGTCGTGC GCCATGCGGC ATCTGTGCAT GCCGCAGGGC
CTCGCACCCG AAGCGCTCAG CCGCCTCGAG TCAGTCATCT GCGCGACGCG CCCGGTCAAG
CGCGGCGAAG CGCTGTTCCG CGAAGGCGAC ACGTTCGACA ACCTGTACGC CGTGCGCTCG
GGTTCGCTGA AAACCGTCGC CACGCGCCAC GACGGCCGTG AACAGGTCAC CGGCCTGCAC
CTGGCAGGCG AAGCGCTCGG CCTCGACGGC ATCTGCGACG ATACTCACCC GCGCACTGCA
GTCGCGCTGG AAGACAGCTC CGTCTGCGTG ATTCCGTACA GCGCGCTCAA GTCGCTGTGC
TCGGAGGCCG GCACGATGCA GCTGCGCATG CACAAGCTGA TGAGCGAGCA GATCGTGCGC
GAAACGTCGC AAACCATGCT GCTCGGTTCG CTGAACGCGG AAGAGCGCGT CGCCGCGTTC
CTGCTCGACG TGTCGGCACG CTACCTGAAG CGCGGCTATT CGCCGTCGGA ATTCAACCTG
CGGATGACGC GCGAAGACAT CGGCAGCTAT CTCGGCATGA CTCTCGAAAC GGTCAGCCGC
ACGCTGTCGA AGTTCCAGAA GCGCGGCCTG ATCGAAATGC AGGGCCGCCT CGTGCAGATC
GTCGATTTCG ACGGCCTTCA TCACGTCTGA
 
Protein sequence
MLTPVATRPA APFHAGSRAA PRQAPHCSSC AMRHLCMPQG LAPEALSRLE SVICATRPVK 
RGEALFREGD TFDNLYAVRS GSLKTVATRH DGREQVTGLH LAGEALGLDG ICDDTHPRTA
VALEDSSVCV IPYSALKSLC SEAGTMQLRM HKLMSEQIVR ETSQTMLLGS LNAEERVAAF
LLDVSARYLK RGYSPSEFNL RMTREDIGSY LGMTLETVSR TLSKFQKRGL IEMQGRLVQI
VDFDGLHHV