| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0203 |
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| Symbol | |
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| ID | 6162725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 214368 |
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| End bp | 215111 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662947 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001789243 |
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| Protein GI | 171056894 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.270076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACT CCCAAGCAAC ACCGTCCGGG CCGGGTGAGG CCGCTGCGCC CGGCGCCGCG
TGTGTCGATG AACGGGCCGC GCACGAACTG GCCGTGCTTT ACCCCGACCT GGCCGCCGTT
GCGCCCCCGC ACTGGCGTGA GGACGTGGCG CGCCTGGGCC CGCCGGTGTC GGTGCCTGCA
GGTGCCGTGC TGTTCGACGA AGGCGCGCCG TGCCGGGGTT TCCCGCTGGT GATCGAAGGC
GCGGTGCGCG TCGCGCGCGG CACGCCCAAC GGCCGCGCGC TCGAGCTCTA CCGGGTGCTG
CCCGGCGAGG TCTGCATCGT CTCGTCGGCC TGCCTGTTCG GCCAGATCGC GTTGACCGCA
CACGGCGTGA GCCTGCAGCC CAGCCGCCTG CTGCTGCTGC CGGCCGACCT GGTGCTGCGC
TGGTGTGCGC ACGAGCCGTT CCGGCGCTTC ATCTTCGGCC AGTTCGCCGG GCGCATGGCC
GACCTGATCA CGCTGGCCGA GGCGGTCGCC TTCCAGCGCC TCGACCAGCG GCTGGCCGGC
GCGCTGCTGG GGCGCGGCGC CACCTTGCAC GTCACCCACC AGCAGCTCGC CGACGAGCTC
GGCACCGTGC GCGAGATCGT CACCCGGCTG CTCAAGCGCT TCGAGCAGGC GGGCTGGGTC
GAACTCGGCC GCGAGCGGGT GCGCTTACTC GATCCGGCGG CATTGCGCCA GCTCGCCGGC
GGCGAGCCGG GTCGGATTGC GTGA
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| Protein sequence | MSNSQATPSG PGEAAAPGAA CVDERAAHEL AVLYPDLAAV APPHWREDVA RLGPPVSVPA
GAVLFDEGAP CRGFPLVIEG AVRVARGTPN GRALELYRVL PGEVCIVSSA CLFGQIALTA
HGVSLQPSRL LLLPADLVLR WCAHEPFRRF IFGQFAGRMA DLITLAEAVA FQRLDQRLAG
ALLGRGATLH VTHQQLADEL GTVREIVTRL LKRFEQAGWV ELGRERVRLL DPAALRQLAG
GEPGRIA
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