| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1260 |
|---|
| Symbol | |
|---|
| ID | 4021737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1421688 |
|---|
| End bp | 1422380 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961453 |
|---|
| Product | Crp/Fnr family transcriptional regulator |
|---|
| Protein accession | YP_568399 |
|---|
| Protein GI | 91975740 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.611189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCGG CGGTCGCGAT GAGCCTGCCC AATCTCGACT GGTTGCAGCG CTTTCCGGCT
TTGGCCGGGA TGCCCGAGAG CGAACGCGCG CCGCTGACCG GCGGCGCGAT GGCGATGAGC
CTTCCCGCCG GCGCTACGGT GTTCGCACCC GATCAGCCCT GCGGCGCATT CATCCTGGTG
ACCGGCGGCA GCGTGCGGGT GTTTCAGCTC GACGCCGAGG GCAACGAGAT CGTGCTGTAT
CGGCTCGGTC CCGGCAGCAT CTGCATCCTG ACCACGCTGG CGCTGCTCGC CGCCGACAGC
TACACCGCCT TCGCCGTCAC CGAGACGCCG GTTGAAGCGG TCGGCCTTCC GGCTTTGACC
TTCAATGACC TGATGGCGCG GTCGGCGCAA TTCCGCAGCT TCGTGTTCCA TGCCCAGGCA
GCGCGGATGG CCGACCTGAT GGCGGTGATC CAGAACGTGG CTTTCGCCTC GATCGATGCC
CGTCTCGCCG CGCGGCTGCT GGTGCTCGCC GACGGCAATC GCGGGCTGTC GATCACCCAT
CAGCAACTCG CCGCCGAGAT CGGCACAGCG CGCGAAGTGG TCAGCCGGCA TCTCAAGGCG
TTCGAGCGGC GTGGCTGGGT CAGCCTCGGC CGCGGCCGGG TCGAGCTGCG CAACGCAGCC
CCGCTGCGCG CGGCGGCGCA GGCCGGCCGC TGA
|
|---|
| Protein sequence | MNPAVAMSLP NLDWLQRFPA LAGMPESERA PLTGGAMAMS LPAGATVFAP DQPCGAFILV
TGGSVRVFQL DAEGNEIVLY RLGPGSICIL TTLALLAADS YTAFAVTETP VEAVGLPALT
FNDLMARSAQ FRSFVFHAQA ARMADLMAVI QNVAFASIDA RLAARLLVLA DGNRGLSITH
QQLAAEIGTA REVVSRHLKA FERRGWVSLG RGRVELRNAA PLRAAAQAGR
|
|---|
| |