More than 300 homologs were found in PanDaTox collection
for query gene Cagg_2104 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  100 
 
 
229 aa  463  9.999999999999999e-131  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  39.8 
 
 
220 aa  150  1e-35  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  39.8 
 
 
231 aa  150  1e-35  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  39.42 
 
 
216 aa  147  1.0000000000000001e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  37.68 
 
 
228 aa  146  2.0000000000000003e-34  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  42.02 
 
 
230 aa  144  1e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  41.81 
 
 
223 aa  140  9.999999999999999e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  36.7 
 
 
222 aa  140  1.9999999999999998e-32  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  40.33 
 
 
221 aa  139  3e-32  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  38.62 
 
 
220 aa  134  9.999999999999999e-31  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  36.54 
 
 
224 aa  133  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  38.14 
 
 
224 aa  131  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  34.55 
 
 
213 aa  130  1.0000000000000001e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  42.02 
 
 
224 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  37.77 
 
 
225 aa  127  1.0000000000000001e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  40.76 
 
 
223 aa  126  4.0000000000000003e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  30.8 
 
 
224 aa  117  1.9999999999999998e-25  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  34.76 
 
 
240 aa  115  6.9999999999999995e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  32.28 
 
 
229 aa  115  7.999999999999999e-25  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  34.83 
 
 
224 aa  112  5e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  35.29 
 
 
218 aa  112  5e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  35.29 
 
 
218 aa  112  5e-24  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  30.21 
 
 
211 aa  109  3e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  30.22 
 
 
208 aa  108  6e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  30.14 
 
 
222 aa  108  6e-23  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  30.17 
 
 
212 aa  105  5e-22  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  34.05 
 
 
247 aa  105  8e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  28.17 
 
 
235 aa  103  3e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  27.32 
 
 
208 aa  102  5e-21  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  29.51 
 
 
201 aa  102  6e-21  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  33.51 
 
 
227 aa  102  7e-21  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  30.68 
 
 
283 aa  96.7  3e-19  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  28.25 
 
 
210 aa  93.6  3e-18  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  24.71 
 
 
201 aa  89  5e-17  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  28.06 
 
 
222 aa  81.3  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  29.9 
 
 
234 aa  79.3  0.00000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  28.04 
 
 
219 aa  79.3  0.00000000000005  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  28.43 
 
 
236 aa  78.2  0.00000000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  29.85 
 
 
227 aa  76.6  0.0000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  30.43 
 
 
226 aa  76.6  0.0000000000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  22.4 
 
 
212 aa  75.9  0.0000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  25.37 
 
 
243 aa  73.2  0.000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  27.53 
 
 
254 aa  71.6  0.000000000008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  27.08 
 
 
236 aa  72  0.000000000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  29.9 
 
 
233 aa  70.9  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  28.04 
 
 
227 aa  70.5  0.00000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  27.75 
 
 
233 aa  70.1  0.00000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.37 
 
 
225 aa  69.7  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  23.91 
 
 
198 aa  70.1  0.00000000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  27.75 
 
 
233 aa  70.1  0.00000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  23.37 
 
 
198 aa  68.9  0.00000000006  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_008787  CJJ81176_0491  putative transcriptional regulator  24.46 
 
 
201 aa  68.6  0.00000000008  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0132873  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  27.81 
 
 
238 aa  68.6  0.00000000009  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.48 
 
 
225 aa  68.2  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  28.4 
 
 
227 aa  68.2  0.0000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013525  Tter_0550  transcriptional regulator, Crp/Fnr family  32.03 
 
 
224 aa  67  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  28.82 
 
 
228 aa  67.4  0.0000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  26.04 
 
 
236 aa  67  0.0000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  28.42 
 
 
241 aa  66.6  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  28.02 
 
 
228 aa  66.2  0.0000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  26.04 
 
 
240 aa  65.5  0.0000000006  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  22.84 
 
 
229 aa  65.5  0.0000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.22 
 
 
231 aa  65.1  0.0000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  25.68 
 
 
352 aa  65.1  0.0000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  27.36 
 
 
239 aa  65.1  0.0000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  27.91 
 
 
226 aa  64.7  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  27.87 
 
 
227 aa  65.1  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  27.32 
 
 
225 aa  64.3  0.000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  26.37 
 
 
231 aa  65.1  0.000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  27.32 
 
 
225 aa  64.3  0.000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  28.92 
 
 
237 aa  63.5  0.000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_009952  Dshi_2528  putative transcriptional regulator  31.03 
 
 
251 aa  63.5  0.000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.244849 
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  28.11 
 
 
257 aa  64.3  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0689  conserved hypothetical protein, putative transcriptional regulator  25.99 
 
 
200 aa  64.3  0.000000002  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  26.78 
 
 
249 aa  63.9  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  26.37 
 
 
221 aa  63.9  0.000000002  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  28.42 
 
 
227 aa  63.5  0.000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  26.9 
 
 
222 aa  63.5  0.000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  26.37 
 
 
240 aa  63.2  0.000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  26.2 
 
 
225 aa  62.8  0.000000004  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  27.27 
 
 
225 aa  62.8  0.000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  25.54 
 
 
227 aa  62.8  0.000000005  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_03580  putative transcriptional regulator  29.9 
 
 
228 aa  62.4  0.000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000980911  hitchhiker  0.0000000000977836 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  27.66 
 
 
235 aa  62.4  0.000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  25 
 
 
218 aa  62.8  0.000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  26.8 
 
 
225 aa  62.4  0.000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  23.23 
 
 
355 aa  62.4  0.000000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  24.51 
 
 
226 aa  62  0.000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  26.37 
 
 
218 aa  62  0.000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  24.74 
 
 
225 aa  62  0.000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.23 
 
 
231 aa  61.6  0.000000009  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011830  Dhaf_3790  transcriptional regulator, Crp/Fnr family  25.13 
 
 
226 aa  60.8  0.00000001  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000171716  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  26.63 
 
 
236 aa  61.6  0.00000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0351  putative transcriptional regulator  29.56 
 
 
228 aa  61.2  0.00000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  23.59 
 
 
229 aa  60.5  0.00000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  27.68 
 
 
236 aa  60.8  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  23.74 
 
 
231 aa  60.5  0.00000002  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  26.67 
 
 
224 aa  60.5  0.00000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  25.61 
 
 
348 aa  60.5  0.00000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  23.74 
 
 
231 aa  60.5  0.00000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
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