More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_3202 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  100 
 
 
220 aa  450  1.0000000000000001e-126  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  46.63 
 
 
228 aa  191  6e-48  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  46.8 
 
 
222 aa  182  3e-45  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  36.62 
 
 
225 aa  161  6e-39  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  41.88 
 
 
216 aa  161  8.000000000000001e-39  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  41.01 
 
 
224 aa  159  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  40.74 
 
 
247 aa  159  4e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  41.83 
 
 
231 aa  158  7e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  41.83 
 
 
220 aa  158  8e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  38.73 
 
 
223 aa  156  2e-37  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  38.94 
 
 
230 aa  149  4e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  42.13 
 
 
221 aa  149  4e-35  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  39.34 
 
 
229 aa  148  6e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  37.13 
 
 
213 aa  147  1.0000000000000001e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  40 
 
 
222 aa  144  9e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  37.02 
 
 
224 aa  142  4e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  37.85 
 
 
224 aa  139  3e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  38.62 
 
 
229 aa  134  9.999999999999999e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  36.76 
 
 
223 aa  133  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  34.3 
 
 
240 aa  131  6.999999999999999e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  35.18 
 
 
224 aa  125  5e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  36.16 
 
 
218 aa  124  1e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  36.16 
 
 
218 aa  124  1e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  32.77 
 
 
201 aa  120  9.999999999999999e-27  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  30.73 
 
 
210 aa  110  2.0000000000000002e-23  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  28.17 
 
 
283 aa  105  6e-22  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  26.27 
 
 
224 aa  104  1e-21  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  28.42 
 
 
212 aa  104  1e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  30.16 
 
 
227 aa  104  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  26.98 
 
 
208 aa  103  3e-21  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  29.61 
 
 
211 aa  96.3  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  22.94 
 
 
235 aa  95.9  4e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  26.26 
 
 
208 aa  93.6  2e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  27.96 
 
 
201 aa  89.4  4e-17  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  26.67 
 
 
212 aa  86.3  3e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  28.64 
 
 
222 aa  72.4  0.000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  24.42 
 
 
233 aa  72  0.000000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  24.42 
 
 
233 aa  72  0.000000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  26.15 
 
 
236 aa  70.9  0.00000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  24.88 
 
 
233 aa  70.1  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  24.34 
 
 
233 aa  70.1  0.00000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.51 
 
 
228 aa  70.1  0.00000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.67 
 
 
227 aa  69.7  0.00000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  24.12 
 
 
234 aa  69.7  0.00000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2528  putative transcriptional regulator  27.52 
 
 
251 aa  69.7  0.00000000003  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.244849 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  25.7 
 
 
236 aa  68.9  0.00000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  27.93 
 
 
222 aa  68.6  0.00000000007  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  26.61 
 
 
218 aa  68.6  0.00000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  27.06 
 
 
223 aa  68.2  0.00000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  26.73 
 
 
240 aa  67.8  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  25.58 
 
 
230 aa  67.8  0.0000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  26.5 
 
 
229 aa  67.8  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  25.23 
 
 
236 aa  67.8  0.0000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  26.34 
 
 
241 aa  66.6  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  29.41 
 
 
229 aa  65.9  0.0000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.53 
 
 
229 aa  65.5  0.0000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  25.56 
 
 
229 aa  64.7  0.000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.49 
 
 
227 aa  64.3  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  25.91 
 
 
239 aa  63.5  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  25.35 
 
 
224 aa  63.9  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  23.3 
 
 
214 aa  63.5  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.06 
 
 
248 aa  63.5  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007948  Bpro_4219  Crp/FNR family transcriptional regulator  25.6 
 
 
219 aa  63.9  0.000000002  Polaromonas sp. JS666  Bacteria  normal  0.408304  normal 
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  27.17 
 
 
231 aa  63.9  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  29.82 
 
 
237 aa  63.2  0.000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.96 
 
 
241 aa  62.8  0.000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  24.24 
 
 
234 aa  62.8  0.000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  27.69 
 
 
234 aa  62.4  0.000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  26.11 
 
 
227 aa  62  0.000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  23.5 
 
 
232 aa  62  0.000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  21.23 
 
 
232 aa  62  0.000000008  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  22.34 
 
 
350 aa  61.6  0.000000009  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2153  transcriptional regulator, Crp/Fnr family  30.56 
 
 
216 aa  61.2  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0015242 
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  26.67 
 
 
224 aa  61.6  0.00000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  23.94 
 
 
235 aa  61.2  0.00000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  22.82 
 
 
218 aa  60.8  0.00000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.24 
 
 
227 aa  60.1  0.00000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_007575  Suden_1312  CRP/FNR family transcriptional regulator  25.24 
 
 
209 aa  60.1  0.00000002  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000433355  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.13 
 
 
227 aa  60.8  0.00000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  26.67 
 
 
227 aa  60.5  0.00000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  26.11 
 
 
227 aa  60.5  0.00000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  26.32 
 
 
246 aa  60.1  0.00000003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  25.97 
 
 
228 aa  59.7  0.00000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  26.4 
 
 
218 aa  59.7  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011901  Tgr7_0642  putative transcriptional regulator, Crp/Fnr family  26.67 
 
 
231 aa  59.3  0.00000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  25.41 
 
 
230 aa  59.3  0.00000005  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  24.38 
 
 
226 aa  58.9  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008599  CFF8240_0798  transcription regulator  28.05 
 
 
213 aa  59.3  0.00000005  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.00000000000892201  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  21.74 
 
 
231 aa  58.9  0.00000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  23.65 
 
 
246 aa  58.5  0.00000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  23.77 
 
 
229 aa  58.5  0.00000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  24.04 
 
 
224 aa  58.5  0.00000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  23.56 
 
 
231 aa  58.2  0.00000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  25 
 
 
198 aa  58.2  0.0000001  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  25.49 
 
 
226 aa  57.8  0.0000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  25.86 
 
 
224 aa  57.8  0.0000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  25 
 
 
198 aa  58.2  0.0000001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.09 
 
 
225 aa  57  0.0000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  23.9 
 
 
352 aa  57.4  0.0000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  26.29 
 
 
234 aa  57.4  0.0000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
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