| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4219 |
|---|
| Symbol | |
|---|
| ID | 4013123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4439705 |
|---|
| End bp | 4440364 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637943866 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_551009 |
|---|
| Protein GI | 91790057 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.408304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAT TTACCGCCTC AGGCGAGGAC CTGTACGCCC GTTTGCCCCC CGAATTGCGT
GCGCTGGCCG TGCGCGGCAT GGTGCGCAGC TACCCCAAAA AGGCGGTGGT GATCAACGAA
GCCGAAATTG GCGACAGCCT GTTTGTGCTG CTCAAGGGCA GCGTCAAGGT GTTTTCGATG
GACGAAAGCG GCCGGGAGAT CACTTTCGGC AGGATTCATG CGGGTGACTA TTTTGGTGAA
ATGTCGCTCG ATGGCGGGCC CCGCTCGGCG TCGGTGATCA CCGTGGAGCC CTGCACCTGT
GCCGTCGTCA ACCGCACCGA AGTGGGTGAG CACCTGGCCA GCGCGCCCGA GTTTGCCCTT
AATCTGGTGA TGCGGGTCAT CCGCCGCGCG CGCGACGCCA CGGAGGCTGC GCGCAACATG
GCGCTGCTGG ACGTGTATGG CCGGCTCATC GCGGTGCTTG AAAAGCAGGA TGGCCTGACA
ACCAGCACCA CGGCTGCCGG CGTCACGCTC GAAGCCATCA CGCACCAGGA AATCGCCAGC
CGCGTCGGCG CCTCCCGCGA GATGGTCAGC CGCCTGCTCA AAGACCTGGA AAAGGGCGGT
TACATCGAGA TGGAAACCAA GCGCATTACG CTGCTCAAGA AGCTGCCCCT GCGCTGGTAG
|
|---|
| Protein sequence | MSSFTASGED LYARLPPELR ALAVRGMVRS YPKKAVVINE AEIGDSLFVL LKGSVKVFSM
DESGREITFG RIHAGDYFGE MSLDGGPRSA SVITVEPCTC AVVNRTEVGE HLASAPEFAL
NLVMRVIRRA RDATEAARNM ALLDVYGRLI AVLEKQDGLT TSTTAAGVTL EAITHQEIAS
RVGASREMVS RLLKDLEKGG YIEMETKRIT LLKKLPLRW
|
|---|
| |