Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1507 |
Symbol | |
ID | 7258476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1602520 |
End bp | 1603203 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643561415 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002457995 |
Protein GI | 219667560 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00368382 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGGTA AAACTAAAGG TATCGTTGAG GAATTAATCG AAACCTTCAG CTTTGCTCAA GAGTTATCCT ATAAGCAGAT TGAGGCCTTG GTGGAACATT CAAATATTCA AGAAGTCCCT GCCGGTACCA TCATTGCGGA AAAGGGTTCC TATTGCCACG GCTTGGCTTT ACTTTTGTCC GGAGAGCTGA GGGTGGCTAT GAATTCGGAG GACGGGCGGG AAGTAACCAT TTATCATATT TTTAAAGGCA GGATTTGTCC TCTGTCGGCG GCCTGTGTGT TAGGTGATTT TAAATGCAAC ACGGTCACGG TTACAGCTGA GACCGACGTT AAGGTCATTT GGGTATCCCG CAGGTTTTTC GCACGGTCTT TTGCCGAATC GGAACCCTTT TATCGGTTTG TGATCAACGA TATATCCAAT CGGCTTTTCG AGGCGACGGA GGTGGTGGAC AGTATTGCCT TTGTTCCGGT AAGAAAACGG CTGGCTCAGC TTTTGTTCGC CAGCAGTAAT GGTGGACGCT CTCCCGTTTA TATGACCCAT GAGGGCTTTG CCCGGGAGCT GGGTACAGCA CGGGAAGTTA TCAGCCGGGA GTTGAAAGGG TTTGAGCGGC TGGGTATTTT AACCTTATCA CGGGGACGTC TGGATATTAA AGATCCTAAG GAATTAGAAA AGCTCGTTCA ATAG
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Protein sequence | MRGKTKGIVE ELIETFSFAQ ELSYKQIEAL VEHSNIQEVP AGTIIAEKGS YCHGLALLLS GELRVAMNSE DGREVTIYHI FKGRICPLSA ACVLGDFKCN TVTVTAETDV KVIWVSRRFF ARSFAESEPF YRFVINDISN RLFEATEVVD SIAFVPVRKR LAQLLFASSN GGRSPVYMTH EGFARELGTA REVISRELKG FERLGILTLS RGRLDIKDPK ELEKLVQ
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