Gene Dhaf_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1507 
Symbol 
ID7258476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1602520 
End bp1603203 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID643561415 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002457995 
Protein GI219667560 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00368382 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGTA AAACTAAAGG TATCGTTGAG GAATTAATCG AAACCTTCAG CTTTGCTCAA 
GAGTTATCCT ATAAGCAGAT TGAGGCCTTG GTGGAACATT CAAATATTCA AGAAGTCCCT
GCCGGTACCA TCATTGCGGA AAAGGGTTCC TATTGCCACG GCTTGGCTTT ACTTTTGTCC
GGAGAGCTGA GGGTGGCTAT GAATTCGGAG GACGGGCGGG AAGTAACCAT TTATCATATT
TTTAAAGGCA GGATTTGTCC TCTGTCGGCG GCCTGTGTGT TAGGTGATTT TAAATGCAAC
ACGGTCACGG TTACAGCTGA GACCGACGTT AAGGTCATTT GGGTATCCCG CAGGTTTTTC
GCACGGTCTT TTGCCGAATC GGAACCCTTT TATCGGTTTG TGATCAACGA TATATCCAAT
CGGCTTTTCG AGGCGACGGA GGTGGTGGAC AGTATTGCCT TTGTTCCGGT AAGAAAACGG
CTGGCTCAGC TTTTGTTCGC CAGCAGTAAT GGTGGACGCT CTCCCGTTTA TATGACCCAT
GAGGGCTTTG CCCGGGAGCT GGGTACAGCA CGGGAAGTTA TCAGCCGGGA GTTGAAAGGG
TTTGAGCGGC TGGGTATTTT AACCTTATCA CGGGGACGTC TGGATATTAA AGATCCTAAG
GAATTAGAAA AGCTCGTTCA ATAG
 
Protein sequence
MRGKTKGIVE ELIETFSFAQ ELSYKQIEAL VEHSNIQEVP AGTIIAEKGS YCHGLALLLS 
GELRVAMNSE DGREVTIYHI FKGRICPLSA ACVLGDFKCN TVTVTAETDV KVIWVSRRFF
ARSFAESEPF YRFVINDISN RLFEATEVVD SIAFVPVRKR LAQLLFASSN GGRSPVYMTH
EGFARELGTA REVISRELKG FERLGILTLS RGRLDIKDPK ELEKLVQ