More than 300 homologs were found in PanDaTox collection
for query gene Maqu_2052 on replicon NC_008740
Organism: Marinobacter aquaeolei VT8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  100 
 
 
213 aa  426  1e-118  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  46.89 
 
 
216 aa  157  8e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  41.92 
 
 
220 aa  151  5e-36  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  46.59 
 
 
224 aa  151  5.9999999999999996e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  41.92 
 
 
231 aa  151  5.9999999999999996e-36  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  42.64 
 
 
223 aa  149  3e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  37.13 
 
 
220 aa  147  1.0000000000000001e-34  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  42.79 
 
 
230 aa  146  2.0000000000000003e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  37.56 
 
 
228 aa  145  5e-34  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  35.94 
 
 
212 aa  144  1e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  37.07 
 
 
225 aa  142  5e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  41.58 
 
 
222 aa  138  7e-32  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  41.62 
 
 
240 aa  137  1e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  41.79 
 
 
224 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  41.08 
 
 
218 aa  132  3e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  41.08 
 
 
218 aa  132  3e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  37.22 
 
 
211 aa  131  9e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  39.35 
 
 
224 aa  130  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  34.55 
 
 
229 aa  130  1.0000000000000001e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  38.5 
 
 
222 aa  129  4.0000000000000003e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  36.08 
 
 
221 aa  128  6e-29  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  42.33 
 
 
223 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  34.27 
 
 
208 aa  120  1.9999999999999998e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  38.25 
 
 
229 aa  120  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  35.96 
 
 
283 aa  115  3.9999999999999997e-25  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  39.2 
 
 
247 aa  110  1.0000000000000001e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  28.98 
 
 
210 aa  109  4.0000000000000004e-23  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  31.64 
 
 
208 aa  107  1e-22  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  31.69 
 
 
224 aa  106  2e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  29.89 
 
 
201 aa  106  2e-22  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  29.57 
 
 
224 aa  104  1e-21  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  28.26 
 
 
235 aa  102  3e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  31.46 
 
 
212 aa  100  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  32.2 
 
 
227 aa  100  1e-20  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  28.9 
 
 
201 aa  95.9  4e-19  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  31.03 
 
 
227 aa  78.2  0.00000000000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  29.9 
 
 
224 aa  73.9  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  29.78 
 
 
229 aa  72.4  0.000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  30.73 
 
 
218 aa  70.5  0.00000000002  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  25.84 
 
 
236 aa  68.9  0.00000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  30.43 
 
 
229 aa  68.6  0.00000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  27.96 
 
 
239 aa  68.2  0.00000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  30.22 
 
 
222 aa  67.4  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  30.27 
 
 
222 aa  66.2  0.0000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  28.87 
 
 
229 aa  65.9  0.0000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.76 
 
 
219 aa  65.1  0.0000000007  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  28.09 
 
 
221 aa  65.1  0.0000000008  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  29.35 
 
 
218 aa  64.7  0.0000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  27.87 
 
 
229 aa  64.7  0.000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.65 
 
 
234 aa  64.3  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.59 
 
 
225 aa  63.5  0.000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2580  Crp/FNR family transcriptional regulator  28.8 
 
 
231 aa  62  0.000000006  Polaromonas sp. JS666  Bacteria  normal  normal  0.117752 
 
 
-
 
NC_007948  Bpro_4219  Crp/FNR family transcriptional regulator  29.21 
 
 
219 aa  62  0.000000007  Polaromonas sp. JS666  Bacteria  normal  0.408304  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  27.37 
 
 
230 aa  61.6  0.000000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  25.49 
 
 
243 aa  61.2  0.00000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  30.06 
 
 
223 aa  61.2  0.00000001  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.72 
 
 
236 aa  60.8  0.00000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25 
 
 
227 aa  60.1  0.00000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  25.79 
 
 
227 aa  60.5  0.00000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.26 
 
 
227 aa  59.7  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  24.63 
 
 
237 aa  58.9  0.00000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.15 
 
 
241 aa  58.5  0.00000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  30.29 
 
 
230 aa  58.5  0.00000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  23.71 
 
 
198 aa  58.5  0.00000008  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_008787  CJJ81176_0491  putative transcriptional regulator  23.71 
 
 
201 aa  58.2  0.00000008  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0132873  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  25.13 
 
 
227 aa  57.8  0.0000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  25.26 
 
 
224 aa  56.6  0.0000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  25.38 
 
 
226 aa  57.4  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  25.9 
 
 
231 aa  57  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.16 
 
 
248 aa  57  0.0000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  24.24 
 
 
236 aa  56.6  0.0000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  26.09 
 
 
235 aa  57.4  0.0000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_012039  Cla_0689  conserved hypothetical protein, putative transcriptional regulator  23.12 
 
 
200 aa  56.2  0.0000003  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  24.49 
 
 
231 aa  56.6  0.0000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  22.68 
 
 
198 aa  55.5  0.0000006  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  27.61 
 
 
238 aa  55.5  0.0000006  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  23.7 
 
 
224 aa  55.5  0.0000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_007908  Rfer_2394  Crp/FNR family transcriptional regulator  27.01 
 
 
255 aa  55.1  0.0000007  Rhodoferax ferrireducens T118  Bacteria  normal  0.0405792  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  23.2 
 
 
227 aa  54.7  0.0000009  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0755  Crp/FNR family transcriptional regulator  25.95 
 
 
235 aa  54.3  0.000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.027549  normal  0.149867 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  25.6 
 
 
235 aa  54.7  0.000001  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  28.72 
 
 
229 aa  54.3  0.000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  26.53 
 
 
228 aa  54.7  0.000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  22.69 
 
 
222 aa  53.9  0.000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_010002  Daci_2132  Crp/FNR family transcriptional regulator  24.74 
 
 
231 aa  53.9  0.000002  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00647195  normal  0.364317 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  22.69 
 
 
222 aa  53.9  0.000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_1849  cyclic nucleotide-binding  27.13 
 
 
195 aa  53.9  0.000002  Pedobacter heparinus DSM 2366  Bacteria  hitchhiker  0.00134256  normal  0.103049 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  24.5 
 
 
236 aa  54.3  0.000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  27.66 
 
 
231 aa  53.9  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.34 
 
 
225 aa  53.1  0.000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008463  PA14_03580  putative transcriptional regulator  25.96 
 
 
228 aa  53.1  0.000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.000980911  hitchhiker  0.0000000000977836 
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  26.2 
 
 
230 aa  53.1  0.000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  24.35 
 
 
231 aa  52.8  0.000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  25.87 
 
 
235 aa  52.4  0.000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  23.71 
 
 
231 aa  52.4  0.000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.43 
 
 
226 aa  52.4  0.000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  23.73 
 
 
214 aa  52.4  0.000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  25.29 
 
 
225 aa  52  0.000006  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0351  putative transcriptional regulator  25.12 
 
 
228 aa  52.4  0.000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  21.79 
 
 
218 aa  52  0.000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
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