Gene Pnap_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3266 
Symbol 
ID4687999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3470808 
End bp3471476 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID639836279 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_983485 
Protein GI121606156 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CCCCCGCACT GCCCACCCCC ACCACGCTTT ACCCGGCCCT GGCGCAGGTG 
CAGCCCTCGC TGGCCGACGT GCATCCGGCC ATCGCGCCCA TCAGTGTGCC GGCCGGCACC
GTTTTATTCA CTGAAAACAC GCCTTGCCAA GGCTTTCCGC TGGTGCTCGA TGGCGAAATC
AAGGTCTCGC GCAGTTCGGG CGATGGCCGT TCGCTGGAGC TGTACCGGGT GGTGCCGGGC
GAGTTGTGCC TGGTGTCGTC GGCGTGTCTG TTTCGCACCC AGCCGCTGTC GGCGCATGGC
GTGACGACCA AGGCCAGCAC GTTGCTGCTG ATCTCGCCCG ACGTGTTCAA CCGCTGGCTG
GAAACCCCGG CCTTTCGCAA CGAGGTGCTG GGCCTGTTCG CCGAACGCAT GGCCGACCTG
ACCTGCCTGA TCGACGCTGT GGCGTTTCAA AGGCTGGACC AACGGCTGGC CGCTGCGCTG
CTGGGTCGGG GGCAAAACCT CGCGCTGACC CATCAGGCGC TGGCCGACGA GCTGGGCACG
GTGCGCGAAA TCATCTCGCG CCTGCTGCGC CGCTTCGAGC GCGAAGGCTG GGTGGAGCTG
GCGCGCGAGC GGATCCACAT CCGCGACAGC GCCGCGCTGC GCGCCATGGC CGCCGCCCTG
CCCGCCTGA
 
Protein sequence
MTQTPALPTP TTLYPALAQV QPSLADVHPA IAPISVPAGT VLFTENTPCQ GFPLVLDGEI 
KVSRSSGDGR SLELYRVVPG ELCLVSSACL FRTQPLSAHG VTTKASTLLL ISPDVFNRWL
ETPAFRNEVL GLFAERMADL TCLIDAVAFQ RLDQRLAAAL LGRGQNLALT HQALADELGT
VREIISRLLR RFEREGWVEL ARERIHIRDS AALRAMAAAL PA