Gene Cagg_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2104 
Symbol 
ID7267611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2579172 
End bp2579861 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID643566937 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002463426 
Protein GI219848993 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAAC CGCACGAACT ACAGCTTGCC GGCGACATCT TACCCTTTTT ACGTGATCCG 
ACGGCGGCAA TTGCGCGCGA TTTCACCGTG CAGGCGACCC TCTTGCGGCT GCCGGCCGGC
GCCACTATCT TTGCCGAAGG CGATGAATGT AACGTCTTTG CCGTGTTGGC CGGTGGGCAG
GTACGGGTGT TCAAAATCGG TGAAACCGGA CGCGAGATCA CTCTCTACCG TTTTGGGCGC
GGCGAGAGTT GCATTCTCAC AACCAGTTGC GTGTTGAGTC AGCGTAACTT CCCGGCGATT
GCAGTGGTAG AGCACGACGC AGCAGCGTTT GTGGTCGATC AGGCGACGTT TCGTGAATGG
ATCGACCATT ACCGGGAGTG GCGTGATTAC GTGTTCCAGT TGCTCTCGCA CCGATTGGCG
ACGGTGATGG CTATTGTTGA TGAGATTGCC TTCCGTCGCG TTGATGTACG GTTAGCTGAG
TTCTTGTTAC GGCATGCCCA AGGCGATCCG CCGACGGTTA GTGCGACGCA CCAGCAGATT
GCCGCCGAGC TAGGCACTTC GCGTGAAGTA GTGAGCCGGA TTTTGGCCGA TTTTAACGAC
GATGGCTTGA TCAGTAGTAG TCGTGGTCAG ATTGTGGTGC GGCATGTGAC AGGGCTGCGC
CAACGCTGCG ACCCGCAGTT CCGAGTGTGA
 
Protein sequence
MLQPHELQLA GDILPFLRDP TAAIARDFTV QATLLRLPAG ATIFAEGDEC NVFAVLAGGQ 
VRVFKIGETG REITLYRFGR GESCILTTSC VLSQRNFPAI AVVEHDAAAF VVDQATFREW
IDHYREWRDY VFQLLSHRLA TVMAIVDEIA FRRVDVRLAE FLLRHAQGDP PTVSATHQQI
AAELGTSREV VSRILADFND DGLISSSRGQ IVVRHVTGLR QRCDPQFRV