281 homologs were found in PanDaTox collection
for query gene Dhaf_0705 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_0705  cyclic nucleotide-binding protein  100 
 
 
227 aa  469  1.0000000000000001e-131  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0702  cyclic nucleotide-binding protein  87.5 
 
 
233 aa  411  1e-114  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3149  cyclic nucleotide-binding protein  49.09 
 
 
238 aa  239  2.9999999999999997e-62  Clostridium phytofermentans ISDg  Bacteria  normal  0.192306  n/a   
 
 
-
 
NC_009012  Cthe_0034  cyclic nucleotide-binding protein  50 
 
 
219 aa  222  3e-57  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000350916  n/a   
 
 
-
 
NC_011898  Ccel_1423  cyclic nucleotide-binding protein  44.44 
 
 
222 aa  206  2e-52  Clostridium cellulolyticum H10  Bacteria  normal  0.0243241  n/a   
 
 
-
 
NC_013170  Ccur_01090  transcriptional regulator, crp family  42.4 
 
 
224 aa  202  4e-51  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2189  hypothetical protein  45.45 
 
 
219 aa  196  3e-49  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0895568  n/a   
 
 
-
 
NC_013204  Elen_0213  transcriptional regulator, Crp/Fnr family  39.01 
 
 
224 aa  191  1e-47  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0741  transcriptional regulator, Crp/Fnr family  36.53 
 
 
222 aa  159  4e-38  Atopobium parvulum DSM 20469  Bacteria  normal  0.343914  normal 
 
 
-
 
NC_010644  Emin_0911  cyclic nucleotide-binding protein  34.53 
 
 
226 aa  153  2e-36  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000610478  hitchhiker  0.00000000000000386547 
 
 
-
 
NC_013165  Shel_05960  cAMP-binding protein  33.33 
 
 
215 aa  139  3.9999999999999997e-32  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.901982 
 
 
-
 
NC_011898  Ccel_1360  transcriptional regulator, Crp/Fnr family  28.77 
 
 
235 aa  137  2e-31  Clostridium cellulolyticum H10  Bacteria  normal  0.990851  n/a   
 
 
-
 
NC_011830  Dhaf_2221  transcriptional regulator, Crp/Fnr family  31.19 
 
 
240 aa  132  3.9999999999999996e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.181319  n/a   
 
 
-
 
NC_011830  Dhaf_3903  transcriptional regulator, Crp/Fnr family  30.56 
 
 
225 aa  117  1.9999999999999998e-25  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000947161  n/a   
 
 
-
 
NC_013170  Ccur_03090  cAMP-binding protein  28.57 
 
 
227 aa  106  4e-22  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.0333204  hitchhiker  1.31136e-22 
 
 
-
 
NC_002967  TDE0478  cyclic nucleotide binding domain-containing protein  30.3 
 
 
216 aa  100  2e-20  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1171  cyclic nucleotide-binding protein  29.41 
 
 
226 aa  98.6  7e-20  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00521884  n/a   
 
 
-
 
NC_011883  Ddes_1827  transcriptional regulator, Crp/Fnr family  26.92 
 
 
229 aa  89.4  4e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2465  transcriptional regulator, Crp/Fnr family  25.84 
 
 
218 aa  89.4  5e-17  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.07605e-19  n/a   
 
 
-
 
NC_008261  CPF_2845  cyclic nucleotide-binding domain-containing protein  25.24 
 
 
226 aa  88.6  7e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2531  cyclic nucleotide-binding domain-containing protein  25.24 
 
 
226 aa  86.7  3e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_13660  cAMP-binding protein  24.74 
 
 
249 aa  84.3  0.000000000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.83 
 
 
248 aa  74.7  0.000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  24.14 
 
 
222 aa  68.9  0.00000000007  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_010003  Pmob_1162  Crp/FNR family transcriptional regulator  23.81 
 
 
220 aa  68.6  0.00000000008  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3951  putative transcriptional regulator, Crp/Fnr family  24.04 
 
 
220 aa  68.6  0.00000000008  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  23.81 
 
 
228 aa  68.2  0.0000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_007519  Dde_0463  Crp/FNR family transcriptional regulator  23.66 
 
 
221 aa  67.4  0.0000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.607183  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  26.7 
 
 
232 aa  67.4  0.0000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  24.75 
 
 
229 aa  67  0.0000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.36 
 
 
226 aa  67  0.0000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  21.84 
 
 
254 aa  65.9  0.0000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  23.36 
 
 
236 aa  65.9  0.0000000005  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  25.23 
 
 
225 aa  64.3  0.000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  23.44 
 
 
236 aa  63.9  0.000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  24.53 
 
 
227 aa  63.2  0.000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  22.49 
 
 
236 aa  63.5  0.000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  24.39 
 
 
225 aa  62.8  0.000000004  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  22.97 
 
 
240 aa  62  0.000000007  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  22.49 
 
 
236 aa  62  0.000000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  23.4 
 
 
215 aa  61.6  0.00000001  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  24.39 
 
 
225 aa  61.2  0.00000001  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_003296  RS02297  transcription regulator protein  23.08 
 
 
225 aa  59.7  0.00000004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  20.97 
 
 
238 aa  59.3  0.00000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  25.47 
 
 
235 aa  58.9  0.00000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  20 
 
 
226 aa  58.9  0.00000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  23.83 
 
 
231 aa  58.5  0.00000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_002950  PG1053  transcriptional regulator, putative  23.2 
 
 
228 aa  58.5  0.00000009  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0216294 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  20.95 
 
 
231 aa  57.8  0.0000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  21.23 
 
 
238 aa  57.8  0.0000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  20.74 
 
 
236 aa  58.2  0.0000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  20.74 
 
 
236 aa  58.2  0.0000001  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  21.01 
 
 
243 aa  57.4  0.0000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  22.49 
 
 
225 aa  57.8  0.0000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  22.49 
 
 
225 aa  57.8  0.0000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  23.29 
 
 
227 aa  57  0.0000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  22.94 
 
 
236 aa  57  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.04 
 
 
225 aa  56.6  0.0000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  25.56 
 
 
236 aa  56.6  0.0000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_009616  Tmel_0756  CRP/FNR family transcriptional regulator  20.1 
 
 
220 aa  56.6  0.0000003  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  24.54 
 
 
249 aa  56.6  0.0000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  21.05 
 
 
236 aa  56.2  0.0000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  22.66 
 
 
225 aa  55.8  0.0000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_008687  Pden_3468  CRP/FNR family transcriptional regulator  20.91 
 
 
236 aa  55.5  0.0000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2120  Crp/FNR family transcriptional regulator  21.74 
 
 
245 aa  54.3  0.000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  22.38 
 
 
224 aa  54.3  0.000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2689  transcriptional regulator, Crp/Fnr family  21.27 
 
 
246 aa  54.7  0.000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  23.15 
 
 
239 aa  54.7  0.000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  22 
 
 
228 aa  54.7  0.000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  22.58 
 
 
208 aa  53.9  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  24.02 
 
 
231 aa  53.9  0.000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011883  Ddes_0528  transcriptional regulator, Crp/Fnr family  22.1 
 
 
244 aa  53.5  0.000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  24.37 
 
 
224 aa  54.3  0.000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_013171  Apre_1580  transcriptional regulator, Crp/Fnr family  26.11 
 
 
215 aa  53.5  0.000002  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  21.6 
 
 
261 aa  53.9  0.000002  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_008782  Ajs_3341  Crp/FNR family transcriptional regulator  21.3 
 
 
221 aa  53.9  0.000002  Acidovorax sp. JS42  Bacteria  normal  normal  0.0836398 
 
 
-
 
NC_011901  Tgr7_0642  putative transcriptional regulator, Crp/Fnr family  23.62 
 
 
231 aa  53.5  0.000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  20.83 
 
 
253 aa  53.1  0.000003  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  22.17 
 
 
226 aa  53.5  0.000003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  21.7 
 
 
243 aa  53.1  0.000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  34.18 
 
 
241 aa  52.8  0.000004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1303  CRP/FNR family transcriptional regulator  20.48 
 
 
229 aa  52.4  0.000005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  22.75 
 
 
231 aa  52.4  0.000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  22.44 
 
 
227 aa  52.4  0.000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  19.89 
 
 
229 aa  52.4  0.000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  22.71 
 
 
234 aa  52  0.000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011071  Smal_2229  transcriptional regulator, Crp/Fnr family  22.28 
 
 
258 aa  52  0.000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.173815  normal 
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  23.19 
 
 
239 aa  52  0.000007  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_009486  Tpet_1578  CRP/FNR family transcriptional regulator  21.13 
 
 
201 aa  52  0.000008  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  19.89 
 
 
246 aa  52  0.000008  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  32.91 
 
 
246 aa  51.2  0.00001  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  20.57 
 
 
231 aa  51.2  0.00001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  21.83 
 
 
230 aa  51.2  0.00001  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_008228  Patl_2699  Crp/FNR family transcriptional regulator  19.5 
 
 
232 aa  51.6  0.00001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.276502  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  33.33 
 
 
224 aa  51.2  0.00001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  22.97 
 
 
262 aa  51.2  0.00001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  22.01 
 
 
248 aa  50.4  0.00002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  22.58 
 
 
229 aa  50.8  0.00002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  22.97 
 
 
248 aa  50.8  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  23.75 
 
 
230 aa  50.8  0.00002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
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