| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05960 |
|---|
| Symbol | |
|---|
| ID | 8394488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 693975 |
|---|
| End bp | 694622 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644985358 |
|---|
| Product | cAMP-binding protein |
|---|
| Protein accession | YP_003143004 |
|---|
| Protein GI | 257063332 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.901982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCT CCGCAATTCG TTCATCTTCC CTGTTCAAGG GCATGTCAGA CGAAGAATTC
GAAACCGCGC TGCACAATCT GGGCGCCCAT GAGCGCACCT TCGCCAAGGG GGAAACCGTC
CTGCGCGCCG GGAACACCAC CCGCGAGATG GGCATCATCC TGGCTGGCAG CGTCACCATC
GAAAACGAAG ACCTGTGGGG CAACCGCACC ATCCTGAACC TTGCCGAATC CGGCGACTTT
TTCGCCGAGG TGTACGCCAT CCTCGGCAAC GAGCCGCTGC TCGTGAACGT CCGCGCCAAC
GAGGACTGCC GCATCCTGTT CCTGCGTCTG GGCGGCAGCC TGCTGGAACA GACCGGCGGC
TGGCAGGCAA AACTCGTCCA GAACCTGCTG CTCATCTCAT CCCGCAAGAA CCTCGTGCTG
TCCGGCCGGG CATTCCATAC CTCCCCGAAA ACCATCCGAG GCCGCATTAT GGCGTACCTG
GACACCATGT CCCGCAAGAA GAACTCCCGC CGATTCGACA TCCCCTTCGA CCGCCAGCAG
ATGGCGGATT ACCTGAACGT GGAACGGACG GCGCTGTCCA AGGAGCTCGG GAAAATGAAG
AAAGACGGCC TGATCGATTA CAGCCGCAAC CATTTCGCCA TCCTCTAG
|
|---|
| Protein sequence | MDTSAIRSSS LFKGMSDEEF ETALHNLGAH ERTFAKGETV LRAGNTTREM GIILAGSVTI
ENEDLWGNRT ILNLAESGDF FAEVYAILGN EPLLVNVRAN EDCRILFLRL GGSLLEQTGG
WQAKLVQNLL LISSRKNLVL SGRAFHTSPK TIRGRIMAYL DTMSRKKNSR RFDIPFDRQQ
MADYLNVERT ALSKELGKMK KDGLIDYSRN HFAIL
|
|---|
| |