Gene Apre_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1580 
Symbol 
ID8398392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1716591 
End bp1717238 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content40% 
IMG OID644995944 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003153322 
Protein GI257067066 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTA GAGAAATTCC AATTTTTAAG AATCTAACAG ATGAAGAGCT AAGAGAAGTA 
GAACTTCTTA GCCAAACTTA CGAAACGGTC TACCCCAAGG GCAGTCACAT ATTCAAAAAA
GACGAGGTCA AGGAGGACTT TTATTATCTA AAAAAGGGCA GCGTCAAGGT CTACAAGATC
GACCCAGAGG GTAAGCGCTA TATCATTGCA AGCTTCAACA AACCGGCGAT TTTTGGAGAA
GTCTATGCTT ATCTTAAAAA TCCCTTCGAC TTCTGGGCAG AGGCTGATGA GGATAGCGAA
ATCTTCGTAA TAAAGGACTT TAGAAAGCTT ATTATGACGA CAAGTTCGAA GAATCTACGC
TTAAACTTCA TAGATATCCT TGCTAAAAAA AGCCTCAAGC TATCCAAGAA AAACCAAATC
AACTCCCAAG CCAAGCTCAA ACAGAAAATA GCAGCCTTCC TCCTCGATAA TGAAGATGAG
GGAAAAGTTC ATTTGTCTAT TTCTAGAGAA GAATGGGCCG ACTATCTAGC AACGACTCGA
CCATCTTTAT CGAGGAGTCT ATCTCTTATG GATAAGGCAG GCCTTATCGA AGTAAGCGAC
AAGGAAATTA ATATCCTAGA TAGAAAAGCC TTGGAGGGCT TGATTTGA
 
Protein sequence
MDLREIPIFK NLTDEELREV ELLSQTYETV YPKGSHIFKK DEVKEDFYYL KKGSVKVYKI 
DPEGKRYIIA SFNKPAIFGE VYAYLKNPFD FWAEADEDSE IFVIKDFRKL IMTTSSKNLR
LNFIDILAKK SLKLSKKNQI NSQAKLKQKI AAFLLDNEDE GKVHLSISRE EWADYLATTR
PSLSRSLSLM DKAGLIEVSD KEINILDRKA LEGLI