More than 300 homologs were found in PanDaTox collection
for query gene Caul_0629 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_0629  transcriptional regulator FixK  100 
 
 
215 aa  424  1e-118  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  43.56 
 
 
231 aa  195  4.0000000000000005e-49  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  46.38 
 
 
229 aa  189  2e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  46.2 
 
 
230 aa  182  5.0000000000000004e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  46.74 
 
 
229 aa  182  5.0000000000000004e-45  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  45.45 
 
 
229 aa  180  1e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  46.2 
 
 
229 aa  179  2e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  45.45 
 
 
231 aa  177  8e-44  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  45.5 
 
 
222 aa  176  2e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1823  transcriptional regulator, Crp/Fnr family  45.13 
 
 
234 aa  174  7e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0333657 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  47.8 
 
 
230 aa  172  3.9999999999999995e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  49.21 
 
 
236 aa  171  9e-42  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_010338  Caul_2975  Crp/FNR family transcriptional regulator  46.67 
 
 
220 aa  165  4e-40  Caulobacter sp. K31  Bacteria  normal  0.169439  normal  0.307783 
 
 
-
 
NC_007960  Nham_4375  Crp/FNR family transcriptional regulator  43.72 
 
 
268 aa  163  1.0000000000000001e-39  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0870  transcriptional regulator FixK  41.94 
 
 
227 aa  163  2.0000000000000002e-39  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2457  Crp/FNR family transcriptional regulator  44.44 
 
 
204 aa  161  6e-39  Caulobacter sp. K31  Bacteria  normal  0.325923  normal  0.600278 
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  44.94 
 
 
229 aa  159  3e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4871  transcriptional regulator, Crp/Fnr family  46.63 
 
 
228 aa  159  3e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  44.94 
 
 
229 aa  159  3e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  45.79 
 
 
227 aa  158  6e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  44.56 
 
 
226 aa  157  1e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  46.88 
 
 
230 aa  155  6e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2220  transcriptional regulator FixK  40.78 
 
 
224 aa  150  1e-35  Chelativorans sp. BNC1  Bacteria  normal  0.552775  n/a   
 
 
-
 
NC_007958  RPD_3266  cyclic nucleotide-binding  39.38 
 
 
220 aa  145  3e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00116153 
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  45.34 
 
 
229 aa  145  4.0000000000000006e-34  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  44.32 
 
 
227 aa  144  9e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  39.77 
 
 
211 aa  141  6e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  40.62 
 
 
262 aa  141  9e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_009475  BBta_p0192  CRP family transcriptional regulator  42.25 
 
 
230 aa  137  1e-31  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  38.42 
 
 
242 aa  135  3.0000000000000003e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  40.09 
 
 
247 aa  134  9.999999999999999e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  42.93 
 
 
246 aa  130  1.0000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  37.14 
 
 
237 aa  129  5.0000000000000004e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_007778  RPB_2158  Crp/FNR family transcriptional regulator  39.61 
 
 
208 aa  128  6e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.198273  normal  0.103025 
 
 
-
 
NC_009621  Smed_5184  transcriptional regulator FixK  35.89 
 
 
211 aa  125  4.0000000000000003e-28  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.639909 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  37.37 
 
 
242 aa  125  5e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  43.96 
 
 
253 aa  124  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  42.11 
 
 
238 aa  121  7e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  42.11 
 
 
238 aa  121  7e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  37.89 
 
 
248 aa  117  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  39.31 
 
 
248 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  39.04 
 
 
249 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  38.42 
 
 
239 aa  116  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  38.42 
 
 
239 aa  116  3e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  34.15 
 
 
230 aa  116  3e-25  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  39.13 
 
 
248 aa  115  5e-25  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  38.73 
 
 
249 aa  115  5e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  38.42 
 
 
239 aa  115  5e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  38.73 
 
 
248 aa  115  5e-25  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  38.73 
 
 
249 aa  115  5e-25  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5737  Crp/FNR family transcriptional regulator  37.37 
 
 
248 aa  114  1.0000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.188641 
 
 
-
 
NC_008061  Bcen_5122  Crp/FNR family transcriptional regulator  37.37 
 
 
248 aa  114  1.0000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4272  transcriptional regulator, Crp/Fnr family  37.71 
 
 
218 aa  113  2.0000000000000002e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  0.71016  normal  0.563993 
 
 
-
 
NC_010623  Bphy_4433  Crp/FNR family transcriptional regulator  39.18 
 
 
224 aa  112  3e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1273  cAMP-binding protein  34.1 
 
 
243 aa  112  4.0000000000000004e-24  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  39.43 
 
 
245 aa  112  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  38.15 
 
 
251 aa  112  5e-24  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  40.11 
 
 
250 aa  112  5e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  38.15 
 
 
251 aa  112  5e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  34.45 
 
 
231 aa  111  7.000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  38.59 
 
 
251 aa  111  8.000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  31.53 
 
 
239 aa  110  1.0000000000000001e-23  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
254 aa  110  1.0000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  39.55 
 
 
250 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  32.98 
 
 
250 aa  110  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  32.45 
 
 
250 aa  110  2.0000000000000002e-23  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  38.15 
 
 
630 aa  110  2.0000000000000002e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  33.49 
 
 
244 aa  110  2.0000000000000002e-23  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  37.43 
 
 
239 aa  110  2.0000000000000002e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  33.15 
 
 
250 aa  109  3e-23  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_008309  HS_0878  fumarate/nitrate reduction transcriptional regulator  31.53 
 
 
257 aa  109  3e-23  Haemophilus somnus 129PT  Bacteria  normal  0.0364978  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  33.15 
 
 
250 aa  109  3e-23  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008709  Ping_0931  fumarate/nitrate reduction transcriptional regulator  30.7 
 
 
249 aa  109  4.0000000000000004e-23  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.896198 
 
 
-
 
NC_007952  Bxe_B0606  Crp/FNR family transcriptional regulator  37.14 
 
 
267 aa  109  4.0000000000000004e-23  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.149995 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  32.6 
 
 
250 aa  108  7.000000000000001e-23  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  30 
 
 
250 aa  108  7.000000000000001e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  29.55 
 
 
250 aa  107  9.000000000000001e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  29.55 
 
 
250 aa  107  9.000000000000001e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  29.55 
 
 
250 aa  107  9.000000000000001e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  29.55 
 
 
250 aa  107  9.000000000000001e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  29.55 
 
 
250 aa  107  9.000000000000001e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
250 aa  107  1e-22  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
250 aa  107  1e-22  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
250 aa  107  1e-22  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  35.36 
 
 
235 aa  107  1e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  32.11 
 
 
249 aa  107  1e-22  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
250 aa  107  1e-22  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  39.52 
 
 
254 aa  107  1e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  30.81 
 
 
250 aa  107  1e-22  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  31.82 
 
 
250 aa  107  1e-22  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  29.49 
 
 
250 aa  107  2e-22  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  29.49 
 
 
250 aa  107  2e-22  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  29.49 
 
 
250 aa  107  2e-22  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  29.49 
 
 
250 aa  107  2e-22  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  30.52 
 
 
252 aa  106  2e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
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