Gene RPD_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1340 
SymbolfixK 
ID4021817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1509660 
End bp1510349 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID637961533 
Producttranscriptional regulator FixK 
Protein accessionYP_568479 
Protein GI91975820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.324269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC AGTCGCTCAG GGCACATACC GCCGCCAAGG CTCCGGTTGA CCCTTCCTGT 
TCCCCGGCGG TTCAGTTTTT TGCAACTACG GGCCATGCCG GGCTGATTGC CTCGGAGTTT
TCCTACAAAA AGGAAGAGGA AATCTACGGC GAGGACGAGC CGTCGGAATA CGTCTATCAA
GTTGTGTCTG GCGCCGTCCG CAGCTACAAG CTGCTGTCAG ATGGCCGCCG TCAGATCGGC
GCTTTCTATC TCGCCGGTGA CGTGTTCGGG CTGGAATCGG GACCGACCCA TCGCCTCACC
GCGGAAGCCA TCGTCGACAC CACCGTCCGC CTGCTGAAGC GCCGCAGCCT CGAACAGGCC
GCCGCCACCG ACGTTCATGT CGCCCGCAGC CTGTGGTCGA TGACCGCCGG CGAGCTGCGC
CACGCCGAAG ACCACATGCT GCTGCTCGGC CGCAAGAATG CGATGGAGCG CGTCGCCAAC
TTCCTGCTGG AAATGGACCG CCGCCTCGCC GTCGCGGGCA TGATGGCGCT GCCGATGTGC
CGCCGCGATA TCGGCGACTA TCTCGGCCTC ACCCTCGAAA CCGTGTCGCG CGCGCTGTCG
CAGCTGCAGA GCCAGGGCAT TCTCGGTTTC TCCGGCGCCC GCCAGATCGA GCTGCGCAAT
CGCCAGCAGC TCCGCAATCT GGACGCCTGA
 
Protein sequence
MLNQSLRAHT AAKAPVDPSC SPAVQFFATT GHAGLIASEF SYKKEEEIYG EDEPSEYVYQ 
VVSGAVRSYK LLSDGRRQIG AFYLAGDVFG LESGPTHRLT AEAIVDTTVR LLKRRSLEQA
AATDVHVARS LWSMTAGELR HAEDHMLLLG RKNAMERVAN FLLEMDRRLA VAGMMALPMC
RRDIGDYLGL TLETVSRALS QLQSQGILGF SGARQIELRN RQQLRNLDA