Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1340 |
Symbol | fixK |
ID | 4021817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1509660 |
End bp | 1510349 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637961533 |
Product | transcriptional regulator FixK |
Protein accession | YP_568479 |
Protein GI | 91975820 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.324269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC AGTCGCTCAG GGCACATACC GCCGCCAAGG CTCCGGTTGA CCCTTCCTGT TCCCCGGCGG TTCAGTTTTT TGCAACTACG GGCCATGCCG GGCTGATTGC CTCGGAGTTT TCCTACAAAA AGGAAGAGGA AATCTACGGC GAGGACGAGC CGTCGGAATA CGTCTATCAA GTTGTGTCTG GCGCCGTCCG CAGCTACAAG CTGCTGTCAG ATGGCCGCCG TCAGATCGGC GCTTTCTATC TCGCCGGTGA CGTGTTCGGG CTGGAATCGG GACCGACCCA TCGCCTCACC GCGGAAGCCA TCGTCGACAC CACCGTCCGC CTGCTGAAGC GCCGCAGCCT CGAACAGGCC GCCGCCACCG ACGTTCATGT CGCCCGCAGC CTGTGGTCGA TGACCGCCGG CGAGCTGCGC CACGCCGAAG ACCACATGCT GCTGCTCGGC CGCAAGAATG CGATGGAGCG CGTCGCCAAC TTCCTGCTGG AAATGGACCG CCGCCTCGCC GTCGCGGGCA TGATGGCGCT GCCGATGTGC CGCCGCGATA TCGGCGACTA TCTCGGCCTC ACCCTCGAAA CCGTGTCGCG CGCGCTGTCG CAGCTGCAGA GCCAGGGCAT TCTCGGTTTC TCCGGCGCCC GCCAGATCGA GCTGCGCAAT CGCCAGCAGC TCCGCAATCT GGACGCCTGA
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Protein sequence | MLNQSLRAHT AAKAPVDPSC SPAVQFFATT GHAGLIASEF SYKKEEEIYG EDEPSEYVYQ VVSGAVRSYK LLSDGRRQIG AFYLAGDVFG LESGPTHRLT AEAIVDTTVR LLKRRSLEQA AATDVHVARS LWSMTAGELR HAEDHMLLLG RKNAMERVAN FLLEMDRRLA VAGMMALPMC RRDIGDYLGL TLETVSRALS QLQSQGILGF SGARQIELRN RQQLRNLDA
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