More than 300 homologs were found in PanDaTox collection
for query gene BR0654 on replicon NC_004310
Organism: Brucella suis 1330



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004310  BR0654  Crp/FNR family transcriptional regulator  100 
 
 
248 aa  501  1e-141  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  98.39 
 
 
251 aa  494  1e-139  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  88.51 
 
 
249 aa  421  1e-117  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  41.59 
 
 
262 aa  177  2e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  46.19 
 
 
250 aa  167  2e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  43.24 
 
 
238 aa  166  2e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  43.24 
 
 
238 aa  166  2e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  45.54 
 
 
254 aa  162  4.0000000000000004e-39  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  42.15 
 
 
253 aa  161  9e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  39.01 
 
 
310 aa  161  1e-38  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009671  Oant_4644  CRP/FNR family transcriptional regulator  41.35 
 
 
232 aa  160  2e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  41.63 
 
 
250 aa  157  1e-37  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  44.9 
 
 
250 aa  155  5.0000000000000005e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  44.9 
 
 
250 aa  155  7e-37  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  39.22 
 
 
237 aa  153  2e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  39.74 
 
 
246 aa  151  1e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  37.28 
 
 
231 aa  149  5e-35  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  41.21 
 
 
239 aa  146  3e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  41.04 
 
 
239 aa  146  3e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  40.57 
 
 
239 aa  145  4.0000000000000006e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  41.71 
 
 
239 aa  146  4.0000000000000006e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  39.81 
 
 
245 aa  145  4.0000000000000006e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  36.21 
 
 
246 aa  132  3.9999999999999996e-30  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  33.91 
 
 
241 aa  131  1.0000000000000001e-29  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  34.91 
 
 
248 aa  130  3e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  34.91 
 
 
248 aa  130  3e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  32.11 
 
 
253 aa  128  7.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_007802  Jann_3858  Crp/FNR family transcriptional regulator  36.06 
 
 
248 aa  128  1.0000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  33.92 
 
 
230 aa  127  2.0000000000000002e-28  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  33.62 
 
 
248 aa  127  2.0000000000000002e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  37.75 
 
 
242 aa  126  3e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  34.4 
 
 
249 aa  126  4.0000000000000003e-28  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  33.91 
 
 
244 aa  125  6e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  33.91 
 
 
244 aa  125  6e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  31.42 
 
 
261 aa  125  7e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  31.42 
 
 
261 aa  125  7e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  33.48 
 
 
243 aa  125  9e-28  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  39.29 
 
 
230 aa  124  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  37.84 
 
 
242 aa  124  1e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  32.44 
 
 
240 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  36.73 
 
 
231 aa  122  6e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  33.62 
 
 
244 aa  120  9.999999999999999e-27  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  33.62 
 
 
244 aa  120  9.999999999999999e-27  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  33.62 
 
 
244 aa  120  1.9999999999999998e-26  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  33.76 
 
 
242 aa  120  1.9999999999999998e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  33.62 
 
 
244 aa  120  1.9999999999999998e-26  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  34.89 
 
 
229 aa  120  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  35.06 
 
 
229 aa  120  3e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  33.01 
 
 
240 aa  119  3e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  33.91 
 
 
230 aa  118  7e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  32.2 
 
 
256 aa  117  9.999999999999999e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  31.8 
 
 
244 aa  117  9.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  29.15 
 
 
250 aa  118  9.999999999999999e-26  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  29.15 
 
 
250 aa  118  9.999999999999999e-26  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  32.22 
 
 
244 aa  117  1.9999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  32.75 
 
 
244 aa  117  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  33.94 
 
 
244 aa  116  3e-25  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  28.74 
 
 
250 aa  116  3e-25  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  34.39 
 
 
231 aa  116  3.9999999999999997e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1258  Crp/FNR family transcriptional regulator  29.52 
 
 
241 aa  115  5e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  39.13 
 
 
215 aa  115  6.9999999999999995e-25  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  7.999999999999999e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  32.21 
 
 
251 aa  115  7.999999999999999e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  8.999999999999998e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  35.86 
 
 
235 aa  115  8.999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  8.999999999999998e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  8.999999999999998e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  8.999999999999998e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  32.21 
 
 
251 aa  115  8.999999999999998e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  37.82 
 
 
227 aa  114  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  114  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  28.21 
 
 
252 aa  114  1.0000000000000001e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_009621  Smed_5184  transcriptional regulator FixK  37.85 
 
 
211 aa  114  2.0000000000000002e-24  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.639909 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
254 aa  113  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  32.37 
 
 
630 aa  114  2.0000000000000002e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  32.31 
 
 
244 aa  113  2.0000000000000002e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1273  cAMP-binding protein  33.16 
 
 
243 aa  114  2.0000000000000002e-24  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  36.72 
 
 
222 aa  114  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3266  cyclic nucleotide-binding  39.13 
 
 
220 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00116153 
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  29.82 
 
 
254 aa  113  3e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  32.31 
 
 
229 aa  113  3e-24  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  37.16 
 
 
229 aa  113  3e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  30.97 
 
 
248 aa  113  3e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  28.51 
 
 
250 aa  113  3e-24  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  39.11 
 
 
211 aa  112  4.0000000000000004e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  32.46 
 
 
229 aa  112  4.0000000000000004e-24  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  30.93 
 
 
256 aa  112  4.0000000000000004e-24  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  36.41 
 
 
229 aa  112  5e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  28.28 
 
 
249 aa  112  7.000000000000001e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  28.95 
 
 
239 aa  111  9e-24  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  28.95 
 
 
241 aa  111  9e-24  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_008686  Pden_1850  CRP/FNR family transcriptional regulator  35.47 
 
 
211 aa  111  1.0000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  29.65 
 
 
250 aa  111  1.0000000000000001e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_012856  Rpic12D_1204  transcriptional regulator, Crp/Fnr family  30.19 
 
 
242 aa  111  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  28.34 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  30.77 
 
 
249 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
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