More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_3277 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  100 
 
 
226 aa  448  1e-125  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  66.22 
 
 
222 aa  273  1.0000000000000001e-72  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1823  transcriptional regulator, Crp/Fnr family  46.89 
 
 
234 aa  174  8e-43  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0333657 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  48.15 
 
 
230 aa  171  9e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  44.76 
 
 
229 aa  166  2e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  47.83 
 
 
229 aa  166  2e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  48.31 
 
 
231 aa  165  5e-40  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  47.83 
 
 
229 aa  164  9e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  49.73 
 
 
227 aa  162  5.0000000000000005e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  42.92 
 
 
229 aa  162  5.0000000000000005e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  50.6 
 
 
230 aa  161  7e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  44.39 
 
 
215 aa  161  9e-39  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  45.21 
 
 
236 aa  160  2e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  51.5 
 
 
227 aa  159  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  47.89 
 
 
231 aa  159  4e-38  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0870  transcriptional regulator FixK  42.64 
 
 
227 aa  157  2e-37  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4871  transcriptional regulator, Crp/Fnr family  45.33 
 
 
228 aa  156  3e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2975  Crp/FNR family transcriptional regulator  49.15 
 
 
220 aa  155  4e-37  Caulobacter sp. K31  Bacteria  normal  0.169439  normal  0.307783 
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  46.32 
 
 
211 aa  154  1e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_007960  Nham_4375  Crp/FNR family transcriptional regulator  50.6 
 
 
268 aa  152  2.9999999999999998e-36  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2457  Crp/FNR family transcriptional regulator  46.37 
 
 
204 aa  151  8.999999999999999e-36  Caulobacter sp. K31  Bacteria  normal  0.325923  normal  0.600278 
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  43.39 
 
 
242 aa  150  1e-35  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  39.55 
 
 
237 aa  146  2.0000000000000003e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  47.2 
 
 
230 aa  143  2e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  41.88 
 
 
229 aa  142  3e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  41.88 
 
 
229 aa  142  4e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  42.86 
 
 
262 aa  140  9.999999999999999e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_008254  Meso_2220  transcriptional regulator FixK  42.44 
 
 
224 aa  140  1.9999999999999998e-32  Chelativorans sp. BNC1  Bacteria  normal  0.552775  n/a   
 
 
-
 
NC_009475  BBta_p0192  CRP family transcriptional regulator  40.76 
 
 
230 aa  133  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_3266  cyclic nucleotide-binding  42.19 
 
 
220 aa  131  7.999999999999999e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00116153 
 
 
-
 
NC_009621  Smed_5184  transcriptional regulator FixK  39.71 
 
 
211 aa  128  8.000000000000001e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.639909 
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  43.03 
 
 
229 aa  127  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  43.82 
 
 
253 aa  127  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  43.1 
 
 
239 aa  124  8.000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  43.43 
 
 
239 aa  125  8.000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  43.43 
 
 
239 aa  124  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  42.61 
 
 
239 aa  122  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  39.9 
 
 
310 aa  121  7e-27  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  37.66 
 
 
242 aa  121  9e-27  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2158  Crp/FNR family transcriptional regulator  39.69 
 
 
208 aa  120  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.198273  normal  0.103025 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  42.7 
 
 
246 aa  120  1.9999999999999998e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  41.57 
 
 
250 aa  117  9.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  34.12 
 
 
230 aa  117  1.9999999999999998e-25  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  41.57 
 
 
250 aa  117  1.9999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  41.44 
 
 
235 aa  117  1.9999999999999998e-25  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  42.86 
 
 
250 aa  115  3.9999999999999997e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  40.96 
 
 
238 aa  113  3e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  40.96 
 
 
238 aa  113  3e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  41.01 
 
 
254 aa  112  6e-24  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  36.68 
 
 
242 aa  112  6e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  34.33 
 
 
241 aa  110  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  39.89 
 
 
245 aa  109  3e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  36 
 
 
231 aa  109  4.0000000000000004e-23  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_009467  Acry_3214  CRP/FNR family transcriptional regulator  36.55 
 
 
230 aa  108  7.000000000000001e-23  Acidiphilium cryptum JF-5  Bacteria  normal  0.939046  n/a   
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  38.2 
 
 
248 aa  108  9.000000000000001e-23  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  40.22 
 
 
249 aa  108  9.000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0749  Crp/FNR family transcriptional regulator  38.83 
 
 
242 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.887641  normal  0.079497 
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  38.2 
 
 
251 aa  107  2e-22  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  34.52 
 
 
254 aa  106  3e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  34.42 
 
 
256 aa  105  4e-22  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  31.22 
 
 
248 aa  102  5e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  30.04 
 
 
248 aa  101  9e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  30.04 
 
 
248 aa  101  9e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  35.94 
 
 
247 aa  100  1e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_007802  Jann_3858  Crp/FNR family transcriptional regulator  32.84 
 
 
248 aa  100  1e-20  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  39.63 
 
 
250 aa  100  3e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_007951  Bxe_A3927  Crp/FNR family transcriptional regulator  37 
 
 
242 aa  99.8  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.729399  hitchhiker  0.00211875 
 
 
-
 
NC_008686  Pden_1850  CRP/FNR family transcriptional regulator  33.69 
 
 
211 aa  99.4  4e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  32.88 
 
 
244 aa  99  5e-20  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  32.72 
 
 
256 aa  98.6  6e-20  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  34.22 
 
 
240 aa  98.6  8e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_003295  RSc1283  putative fumarate and nitrate reduction regulatory transcription regulator protein  35.78 
 
 
242 aa  97.1  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0516193  normal  0.32826 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  34.76 
 
 
249 aa  96.7  3e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  30.3 
 
 
249 aa  96.3  4e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  33.69 
 
 
240 aa  95.9  5e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_010506  Swoo_2417  fumarate/nitrate reduction transcriptional regulator  29.8 
 
 
249 aa  94.4  1e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0646393  decreased coverage  0.000000159166 
 
 
-
 
NC_012856  Rpic12D_1204  transcriptional regulator, Crp/Fnr family  34.25 
 
 
242 aa  94.4  1e-18  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1111  transcriptional regulator, Crp/Fnr family  35.2 
 
 
242 aa  94  2e-18  Ralstonia pickettii 12J  Bacteria  normal  0.700786  normal  0.531022 
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  31.55 
 
 
246 aa  93.2  3e-18  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_007347  Reut_A2034  cyclic nucleotide-binding: regulatory protein, Crp  33.33 
 
 
232 aa  92.8  4e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3552  regulatory protein Crp  29.82 
 
 
217 aa  92.8  4e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2279  Crp/FNR family transcriptional regulator  34.52 
 
 
258 aa  92.8  4e-18  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  29.8 
 
 
250 aa  92.4  5e-18  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_007973  Rmet_2037  Crp/FNR family transcriptional regulator  32.8 
 
 
232 aa  92.4  5e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.441781 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  29.41 
 
 
250 aa  92  7e-18  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  29.41 
 
 
250 aa  92  7e-18  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  31 
 
 
274 aa  91.7  8e-18  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  29.8 
 
 
250 aa  91.7  8e-18  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  31.66 
 
 
244 aa  91.7  9e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  33.17 
 
 
244 aa  91.3  1e-17  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  29.41 
 
 
250 aa  91.7  1e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  33.17 
 
 
244 aa  91.3  1e-17  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  33.17 
 
 
244 aa  91.3  1e-17  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  33.17 
 
 
244 aa  91.3  1e-17  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  33.33 
 
 
244 aa  90.9  1e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  29.41 
 
 
249 aa  91.3  1e-17  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_011989  Avi_1273  cAMP-binding protein  34.68 
 
 
243 aa  90.9  1e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  29.41 
 
 
250 aa  91.3  1e-17  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  29.44 
 
 
254 aa  90.1  2e-17  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  28.88 
 
 
250 aa  90.5  2e-17  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
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