Gene Nham_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1951 
SymbolfixK 
ID4030554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2168170 
End bp2168865 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID637970412 
Producttranscriptional regulator FixK 
Protein accessionYP_577214 
Protein GI92117485 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACCC AGACGATCAC TGCCCCGACC GTCAACGCTC TCGACATTCC GCACGTCATG 
GCGGCTGAAC CGGCCGACCA ATTCAGCGCA ATCGTCCGTT GCTCGAGAGT GGTCGCAAGC
GAATTTTCCT ACAATAAGGA TGAGGAAATC TACGGCGAGG GTGAGCCTTC CGAATATCTC
TACCAGATCA TCAGCGGCGC AGTCCGTACC TATAAACTCC TGAGCGACGG ACGACGGCAA
ATCAGTGCAT TCCATCTGCC GGGCGATGTC TTTGGCCTCG ACCCCGGCTC GGAGCACCGG
CTCACTGCCG AAGCAATCAC AAACACCACT GTCCGCCTGG TGCCTCGTCG CAACCTCGAG
AAGGCTGCAG CGTCGAACGT TCAGGTTACC CGCAATCTCT GGACGATAAC GGCAAGCGAC
CTCCGGCATG CCGAAGACCA TATGCTGCTT CTTGGCCGCA AGACTGCGAT GGAGCGCGTC
GCCACTTTCC TGCTGGAAAT GGACCGCCGA CTCGCCAGAG CCGGCATGAT GGCGCTCCCG
ATGTGTCGTC GCGATATTGG CGATTACCTC GGGCTGACGC TCGAGACCGT CTCGCGGGCG
CTCTCACAAC TCAACGATGA GGGCATCCTG ATGTTTTCGA GCGCTCGCCA AATCGCGCTG
CGCAACCGAC AACGGCTGTC CACCATGGAG GCTTGA
 
Protein sequence
MHTQTITAPT VNALDIPHVM AAEPADQFSA IVRCSRVVAS EFSYNKDEEI YGEGEPSEYL 
YQIISGAVRT YKLLSDGRRQ ISAFHLPGDV FGLDPGSEHR LTAEAITNTT VRLVPRRNLE
KAAASNVQVT RNLWTITASD LRHAEDHMLL LGRKTAMERV ATFLLEMDRR LARAGMMALP
MCRRDIGDYL GLTLETVSRA LSQLNDEGIL MFSSARQIAL RNRQRLSTME A