Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1951 |
Symbol | fixK |
ID | 4030554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2168170 |
End bp | 2168865 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637970412 |
Product | transcriptional regulator FixK |
Protein accession | YP_577214 |
Protein GI | 92117485 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACCC AGACGATCAC TGCCCCGACC GTCAACGCTC TCGACATTCC GCACGTCATG GCGGCTGAAC CGGCCGACCA ATTCAGCGCA ATCGTCCGTT GCTCGAGAGT GGTCGCAAGC GAATTTTCCT ACAATAAGGA TGAGGAAATC TACGGCGAGG GTGAGCCTTC CGAATATCTC TACCAGATCA TCAGCGGCGC AGTCCGTACC TATAAACTCC TGAGCGACGG ACGACGGCAA ATCAGTGCAT TCCATCTGCC GGGCGATGTC TTTGGCCTCG ACCCCGGCTC GGAGCACCGG CTCACTGCCG AAGCAATCAC AAACACCACT GTCCGCCTGG TGCCTCGTCG CAACCTCGAG AAGGCTGCAG CGTCGAACGT TCAGGTTACC CGCAATCTCT GGACGATAAC GGCAAGCGAC CTCCGGCATG CCGAAGACCA TATGCTGCTT CTTGGCCGCA AGACTGCGAT GGAGCGCGTC GCCACTTTCC TGCTGGAAAT GGACCGCCGA CTCGCCAGAG CCGGCATGAT GGCGCTCCCG ATGTGTCGTC GCGATATTGG CGATTACCTC GGGCTGACGC TCGAGACCGT CTCGCGGGCG CTCTCACAAC TCAACGATGA GGGCATCCTG ATGTTTTCGA GCGCTCGCCA AATCGCGCTG CGCAACCGAC AACGGCTGTC CACCATGGAG GCTTGA
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Protein sequence | MHTQTITAPT VNALDIPHVM AAEPADQFSA IVRCSRVVAS EFSYNKDEEI YGEGEPSEYL YQIISGAVRT YKLLSDGRRQ ISAFHLPGDV FGLDPGSEHR LTAEAITNTT VRLVPRRNLE KAAASNVQVT RNLWTITASD LRHAEDHMLL LGRKTAMERV ATFLLEMDRR LARAGMMALP MCRRDIGDYL GLTLETVSRA LSQLNDEGIL MFSSARQIAL RNRQRLSTME A
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