Gene Avi_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1273 
Symbol 
ID7387645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1068777 
End bp1069508 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content52% 
IMG OID643650706 
ProductcAMP-binding protein 
Protein accessionYP_002548912 
Protein GI222147955 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTT CTTCGCCCGC TAGCCGACCG CCACTCCAGA TCAGAGCAAC GCCTGTATGG 
TCGCCGCAGC GAGATGAGAA CGCGGAACAT ATCGTCCTAA GCCCAGATGA ACAGTACGAA
CTTGGGCGAC TGGGAGAAAT CATAGAGTAT CGCACGGCGA AATTAGAGAT ATTGTCGCAA
AGTGAACCCG CAGATTTCCT CTATTTGCTT ATCGAGGGAG TCGTTCAGGC CTGTCACTCG
CTGAAGGATG GTCAACGGCA GATAGTGGCG TTTTACTGGC CAGGCGATAT CTTTGGTCTG
GCGGAAAAGG GACTGTACGT TAACTCGTCA GAGGCGGTAA CACCCTGCTC CGTATACCGC
TTTCCGTTCC GCAAGCTGGA GAAATTCCTT CTGGAACATC CGAGGATTCA GCAGGGTTTC
TTCGTCAAGG CGGTCCACGA AATTCGTACC GCACAACGAC ACACCATCAC AATCGGACAA
TTGGAGCTGC CACAGCGCTT AGCTGCGTTT CTAGTAGATT GTTCGGAACA CGATCGCTAT
TTCGACAGTG AAAGCTCGAC CTTATCGCTT CCGATGTTGC GCTACGATAT TGCGGACTAT
CTTGGGACCT CGGTAGAAGC AGTGTCACGC ACTTTTGCGC TGCTGGAAAA AAACGGCCTC
GTCCAGCGAA AGGGGCCGAG GAAGCTCGAG ATAAGCATGA AGAAACTGAT CGACTTTTCA
GGTATCGCCT GA
 
Protein sequence
MSLSSPASRP PLQIRATPVW SPQRDENAEH IVLSPDEQYE LGRLGEIIEY RTAKLEILSQ 
SEPADFLYLL IEGVVQACHS LKDGQRQIVA FYWPGDIFGL AEKGLYVNSS EAVTPCSVYR
FPFRKLEKFL LEHPRIQQGF FVKAVHEIRT AQRHTITIGQ LELPQRLAAF LVDCSEHDRY
FDSESSTLSL PMLRYDIADY LGTSVEAVSR TFALLEKNGL VQRKGPRKLE ISMKKLIDFS
GIA