Gene RPC_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4055 
SymbolfixK 
ID3969304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4505195 
End bp4505884 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID637927159 
Producttranscriptional regulator FixK 
Protein accessionYP_533900 
Protein GI90425530 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC AGTCGGTCAG AACTTCGGAC GGCAACGCCA AGTCGGGCAA CACGGCCTTC 
GCCTCGGGCG ACCAGTTCTC GACGGTAACC GGCCATGCCG GTCTAGTCGC CTCCGAATTT
TCCTACCGGA AGGAAGAGGA AATCTACGGC GAGGACGAAA CCTCCGAATA CGTCTATCAA
GTGGTATCTG GAGCCGTTCG CAACTACAAG CTGCTGTCCG ATGGTCGCCG CCAGATCGGC
GCCTTCTATC TCCCGGGCGA CGTGTTCGGC CTTGAATCGG GGCCGGTGCA TCGGCTGACC
GCCGAAGCCA TCGTCGACAC CACGGTCCGC CTGTTGAAGC GCCGCAGCCT GGAACAGGCA
GCCGCCACCG ACGTCAATGT CGCTCGCAGC CTGTGGGCGA TGACCGCCGG CGAATTGCGC
CACGCCGAAG ATCACATGCT GTTGCTCGGC CGCAAGAATG CGATGGAGCG CGTCGCCAAT
TTCCTGCTCG AGATGGATCG CCGCCTCGCC GTCGCTGGCC TGATGGCGCT GCCGATGTGC
CGCCGCGACA TCGGCGACTA CCTCGGCCTC ACCCTCGAAA CCGTTTCTCG TGCGCTGTCG
CAACTCCATA GCCAGGGCGT GCTTGGCTTC TCCGGAGCCC GGCAGATCGT GCTGCGCAAC
CGTCAGCACC TGCACAACAT GGACGCTTGA
 
Protein sequence
MLNQSVRTSD GNAKSGNTAF ASGDQFSTVT GHAGLVASEF SYRKEEEIYG EDETSEYVYQ 
VVSGAVRNYK LLSDGRRQIG AFYLPGDVFG LESGPVHRLT AEAIVDTTVR LLKRRSLEQA
AATDVNVARS LWAMTAGELR HAEDHMLLLG RKNAMERVAN FLLEMDRRLA VAGLMALPMC
RRDIGDYLGL TLETVSRALS QLHSQGVLGF SGARQIVLRN RQHLHNMDA