| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1799 |
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| Symbol | |
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| ID | 4604049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2191078 |
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| End bp | 2191830 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639781165 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_927674 |
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| Protein GI | 119774934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.417815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.180258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCG AACAAAACAA ACATCGCCGC CCCGCCGCCA CCGGTTGCAC CATCCATTGC
CACGATTGTA GTATGGGAAC CCTATGTATT CCGTTCACGC TCAACGCCAA CGAATTGGAT
CAATTGGATA ATATTATTGA GCGTAAAAAG CCTATCCAGA AAGGCGAGCA AATTTTCAAA
TCCGGCGACT CTCTCAAATC TCTGTATGCC ATTCGTTCCG GCACCATTAA AAGCTATACC
ATCACCGAAC AGGGTGACGA GCAGATAACC GGTTTCCATC TTGCCGGTGA TGTTATCGGT
TTCGACGGTA TTCATGCCAA CACTCATCAA AGTTTTGCCC AGGCGCTTGA AACCTCCATG
GTGTGCGAAA TTCCCTTCAA TACGCTGGAC GAACTCTCAG GTTCCATGCC CAAGCTTCGC
CAGCAGATCA TGCGTTTAAT GAGCAATGAA ATTATGTCGG ATCAGGAAAT GATCCTGCTG
CTCAGCAAGA AGAACGCTGA AGAGCGTCTG GCTGCATTTA TCGCCAACCT TGCCACCCGC
TATGGTAACC GCGGTTTTTC CCAGCGAGAG TTCCGTTTGA CCATGACCCG CGGCGACATA
GGTAATTATC TGGGGTTAAC AGTAGAAACC ATCAGCCGTT TGTTGGGGCG TTTCCAGAAA
TCCGAACTTA TCGAAGTCAA AGGCAAGTAC ATCACCATCA TTGACTTCGC TGGCTTGAAT
ACGCTGGCAG GCAATGCCCG TATCGCAAGA TAA
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| Protein sequence | MPIEQNKHRR PAATGCTIHC HDCSMGTLCI PFTLNANELD QLDNIIERKK PIQKGEQIFK
SGDSLKSLYA IRSGTIKSYT ITEQGDEQIT GFHLAGDVIG FDGIHANTHQ SFAQALETSM
VCEIPFNTLD ELSGSMPKLR QQIMRLMSNE IMSDQEMILL LSKKNAEERL AAFIANLATR
YGNRGFSQRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SELIEVKGKY ITIIDFAGLN
TLAGNARIAR
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