Gene Dhaf_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2221 
Symbol 
ID7259190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2401275 
End bp2401997 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content49% 
IMG OID643562110 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002458690 
Protein GI219668255 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.181319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACT GTCTTTCCGC AATGCGTTCG GTGGAATTTC TGAGTCATTT TTCCGATGAT 
GAGCTCCAGG AGATTGGCAA ATGCCTGCTG ACCAGGGTGC AGAGGTACAA AAAGGGTGAA
AAAGTTTTTG AGGCGGGTCA ACCCGCTGTT TCCATGGGCG TTATTCTGCA GGGAAGGGTG
TATATCGAGG ATGATGATGC TTTCGGGAAC AGGAGCATTC TGGCGGAACT GCACCAGGGG
GATACCATGG CCGGCAGCTG TGTCTGTGCC CAAAGGCCCA GTTATCTCAC CTCCTTTATC
GCCGCGGAGC CGTCGGAGAT TCTATTGCTG AATTGCGGAA CGATCTATAC GAACTGCAAT
AAAAGCTGCA GTATTCGCGG CAAGATGCTG GAAAATCTCC TGAAAATTAT TGCGGCGGAG
GCGGTCACTC AGAGCCGCAA ACTCAAATGC TTATCACAAC GGAGTATCAG GGGAAAATTG
CTGGCTTTTT TCTCTTACTG TGTTCAGGAA AAGGGAGAAA ACAGCTTCAC TATCCGTTTT
TCCAGACAGG AATTGGCGGA TTTTCTTTGT TTAAACCGCA GTGCCATGTC CAAAGAGCTG
GGCAAGATGC GGGATGACGG TCTGCTGCGC TTTGACCGGA ACTATTTTGA GATGCTGTCT
TGCGAAGTCA AAAGGGAATC ACCGGCACAG GATAAGATGA CTACTTTTTT GAAAGCTATT
TGA
 
Protein sequence
MADCLSAMRS VEFLSHFSDD ELQEIGKCLL TRVQRYKKGE KVFEAGQPAV SMGVILQGRV 
YIEDDDAFGN RSILAELHQG DTMAGSCVCA QRPSYLTSFI AAEPSEILLL NCGTIYTNCN
KSCSIRGKML ENLLKIIAAE AVTQSRKLKC LSQRSIRGKL LAFFSYCVQE KGENSFTIRF
SRQELADFLC LNRSAMSKEL GKMRDDGLLR FDRNYFEMLS CEVKRESPAQ DKMTTFLKAI