| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0741 |
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| Symbol | |
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| ID | 8413606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 821570 |
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| End bp | 822238 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022323 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003179761 |
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| Protein GI | 257784544 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.343914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTTGC AAGATATCAA GCCTTCGTTT TTACTCAACA CTGTGGTGTT TAAAGGAGTA
AAACCAGAGC AGTTAGAGCT ACTTTTAAAA CATCTACGTG CAGTAGTGCG TACATATGAA
CCTGGAGAAA TCATTCTATG TGCTGGCGAT AAGGCTCACC AATTTGGCAT TGTCATCTCT
GGCGCCATTC ACGTAGAAGG CTCAGATTCT CAAGGTAATA TCTCTGTGAT GGGTGCTTTT
AATACAGGAG AAACCTTTGG AGAGGCATAC GCGGCTCTTG GAAACGTACC ACTTTTGACC
TCAGTTGTTG CCACAGAGAA ATCAGATATT CTGCTGCTCG ATGTGCGACA GATCACTACC
AGAACGTGTG ACATCTGCGG TGGTGTGGAT ATTATCACCA GAAACCTTAT GGCTTCTATT
GCGAGAAAAA ACATTATGCT GAGCCGTCGT ATTCAAGATG CTGCACCAAA AAGTATTCGC
GGCAAACTGA TGGCATACTT GAATACACGC TCGCAAGCTA CGGGTTCATC TGAGTTTGAT
ATCCCCTACA ATCGCCAACA GCTTGCCGAT TATCTTGGTG TAGATAGAAG CGCTTTAAGC
GCAGTAATAT CTTCTTTAAG TAAAGAAGGC GTCTTTGAAG TAAAGCGAAG TCACTTCAAA
CTTTTATAA
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| Protein sequence | MNLQDIKPSF LLNTVVFKGV KPEQLELLLK HLRAVVRTYE PGEIILCAGD KAHQFGIVIS
GAIHVEGSDS QGNISVMGAF NTGETFGEAY AALGNVPLLT SVVATEKSDI LLLDVRQITT
RTCDICGGVD IITRNLMASI ARKNIMLSRR IQDAAPKSIR GKLMAYLNTR SQATGSSEFD
IPYNRQQLAD YLGVDRSALS AVISSLSKEG VFEVKRSHFK LL
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