Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0034 |
Symbol | |
ID | 4808799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 43237 |
End bp | 43896 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105443 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001036468 |
Protein GI | 125972558 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000350916 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATTTGGATGT TTTAAAAAAA GTTAATTTGT TTAAAGGAAT TGACGAATCG GATTTGCTTT CGCTTTTGGC CTGTTTGTCA AGCAAGCTTG AGCATTACAA AAAAAACGAG ATTGTTTTTA TGAGCGGTGA GGCCATTAAT TCTTTTGGCA TAGTTTTGTC AGGAGAGGTT CAGATTGTAC AGGAAGATTA TTACGGTAAC AGAAGTATCC TGGCCAGGAT AGGTGTGGGC AATCTGTTTG CCGAATCTTT TGCCTGTGCT CAAATAGAAG CTCTTCCGGT CAGTGTAATT ACAACCACCG AAAGCGATCT TCTTTTTATC GACTGCCGTA AACTCGCAAA GCCATGTGCT ACTGCCTGCG CTTTTCACAG TCGCCTGATT CAAAATATGC TGCATATTAC TGCGATGAAA AATATATCTT TAACACAAAA AATTGAGTTT ATTTCAAAGC GTACCACTCG GGAAAAGCTT TTGGCCTATC TTTCCAGTGA GGCACAAAAG GCAGGCAGCA ATCGTTTTTC CATTCCGTTC AACCGTCAGG AACTTGCAGA TTATCTGTCG GTTGACCGCA GCGCAATGTC GGCGGAACTT AGCAAGCTTA GAAAAGAAGG TATTTTAAAT TATAACAAAA ACCATTTTGA ATTATTGTAA
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Protein sequence | MKKYLDVLKK VNLFKGIDES DLLSLLACLS SKLEHYKKNE IVFMSGEAIN SFGIVLSGEV QIVQEDYYGN RSILARIGVG NLFAESFACA QIEALPVSVI TTTESDLLFI DCRKLAKPCA TACAFHSRLI QNMLHITAMK NISLTQKIEF ISKRTTREKL LAYLSSEAQK AGSNRFSIPF NRQELADYLS VDRSAMSAEL SKLRKEGILN YNKNHFELL
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