Gene Ddes_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1827 
Symbol 
ID7285540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2203756 
End bp2204445 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID643582647 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002480402 
Protein GI220905090 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGG CCCTGAAAAG CTGCGATCTT TTCGCCCACA TGAGCCCGGA TGAGGCAAAG 
CTTTGCCTGG GGTGCAGCGG CGCGGTGGAA GAAAAATACG GCAAAGGGGG CATGGTTTTC
TGCGAAACAG ACGCCCCCAC CCGGCTTTTT GTCCTGCTGG AAGGCGCCGT TTCCGTAGGG
CGTGACAGCG CCGACGGCAG ACGCGCCGTG ATGGCCCGTA TTGACCGCCC CGGCGACCTC
TTCGGCGAAG TCTATGTTTT TCTTGATCAG GCCAGCTACG GCTGTAGCGT CCAGGCCGAA
AGCCCCGTGC GCGTGTTGGC CATACCGGCA AAATTTTTCT ATTCCACCTG CGAAAAACGC
TGCAGCATGC ATGCACAGAT CATACGCAAC ATGCTTTCGG TATTCGCCCG CAAGGCTTTT
TTTCTGACGC GCCGCGTATC ACTGCTTTCA TCGGGCAGCC TGCGTCGCAA GATCGCCTCT
TTACTGCTTG AGCACCGCAA CCCTGACGGC TCGCTGAATC TGCTCATGAA CCGTGAACAG
ATGGCCGACT TTCTGGGCGT CACGCGGCCC TCGCTTTCAC GCGAGCTGGC AGCCATGCGT
GATGAAGGCC TGCTGCACAT CAACGGAAAA AACATCTCCC TGCCTCATCC CGACCGCCTG
AAAGAATTTT ACGATTATTC TGTTCCGTAA
 
Protein sequence
MNQALKSCDL FAHMSPDEAK LCLGCSGAVE EKYGKGGMVF CETDAPTRLF VLLEGAVSVG 
RDSADGRRAV MARIDRPGDL FGEVYVFLDQ ASYGCSVQAE SPVRVLAIPA KFFYSTCEKR
CSMHAQIIRN MLSVFARKAF FLTRRVSLLS SGSLRRKIAS LLLEHRNPDG SLNLLMNREQ
MADFLGVTRP SLSRELAAMR DEGLLHINGK NISLPHPDRL KEFYDYSVP