Gene TDE0478 details

Gene Information

• Locus tag: TDE0478
• ID: 2740525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 534423
• End bp: 535073
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637159350
• Product: cyclic nucleotide binding domain-containing protein
• Protein accession: NP_971092
• Protein GI: 42525994
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCTA TTTTTAAAAA TATACCCGCT CAAGAAGCGG AAAAATATTT AAAAAATACC 
AAGGCTAAAA CCCTCAACTA TAAAAAAGAT GCCTTTATCT TTTTTGAGGG CGATACTCCC 
GCTTTTTTCT TTGTTTTAAA ATCGGGTATC GTTCAAATCG AAAAAAACAC TGCCGATGGA 
AAGCGGCTTA TTGTAAACCG CTTTGAAAAC CCCGGTACGG TTTTTGCCGA AGTCTATGCT 
CTTTTGGATT CGGCTATCTA CGATTACTCA TGCCGTGTAA TTAGCGATGC CGAAATTCTT 
TGTCTCCCCA TAGAAGGGGT CTTTGGTGCC GGAGCGTACT CCGAAACTCA TTTTAAGGTT 
CTAAAGAACC TATTAAATAT TTTAGCTCAT AAGGCTTATT TTTTAAACCA AAAGCTTCTT 
ATCTTTTCTT CATTCAGTCT TCGTCAAAAG ATAGCCCTCT ATTTATTGCA GCAGGCTGAA 
GGAAGTTCAA AGGTTGAGCT AAACCTAAAC AGGGAGGCTA TGGCCGAATA CTTAGCGGTT 
CCTCGGCCAT CTTTATCCCG CGAGCTTATG AGCATGCAAA AAGATGGGCT TTTAAAAATC 
GAAAAAGATA CCATCATTGT CAACCTTGAT AAACTCGAAG ACTTTAGCTA A 

 

Protein sequence

MNPIFKNIPA QEAEKYLKNT KAKTLNYKKD AFIFFEGDTP AFFFVLKSGI VQIEKNTADG 
KRLIVNRFEN PGTVFAEVYA LLDSAIYDYS CRVISDAEIL CLPIEGVFGA GAYSETHFKV 
LKNLLNILAH KAYFLNQKLL IFSSFSLRQK IALYLLQQAE GSSKVELNLN REAMAEYLAV 
PRPSLSRELM SMQKDGLLKI EKDTIIVNLD KLEDFS