More than 300 homologs were found in PanDaTox collection
for query gene Tpet_1578 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009486  Tpet_1578  CRP/FNR family transcriptional regulator  100 
 
 
201 aa  396  9.999999999999999e-111  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1644  Crp/FNR family transcriptional regulator  71.36 
 
 
200 aa  299  2e-80  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1162  Crp/FNR family transcriptional regulator  39.89 
 
 
220 aa  134  9.999999999999999e-31  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0756  CRP/FNR family transcriptional regulator  35.39 
 
 
220 aa  130  2.0000000000000002e-29  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1303  CRP/FNR family transcriptional regulator  35.26 
 
 
229 aa  122  4e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3951  putative transcriptional regulator, Crp/Fnr family  29.78 
 
 
220 aa  92  5e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1171  cyclic nucleotide-binding protein  29.05 
 
 
226 aa  82.8  0.000000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00521884  n/a   
 
 
-
 
NC_008262  CPR_2531  cyclic nucleotide-binding domain-containing protein  28.49 
 
 
226 aa  80.9  0.00000000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  28.57 
 
 
227 aa  80.1  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2845  cyclic nucleotide-binding domain-containing protein  27.42 
 
 
226 aa  80.5  0.00000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  29.02 
 
 
236 aa  77  0.0000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_002950  PG1053  transcriptional regulator, putative  25.95 
 
 
228 aa  75.1  0.0000000000006  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0216294 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.96 
 
 
229 aa  73.2  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1360  transcriptional regulator, Crp/Fnr family  24.5 
 
 
235 aa  72.8  0.000000000004  Clostridium cellulolyticum H10  Bacteria  normal  0.990851  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  26.09 
 
 
232 aa  72  0.000000000006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  25.39 
 
 
352 aa  70.5  0.00000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  23.46 
 
 
229 aa  69.3  0.00000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_011883  Ddes_1827  transcriptional regulator, Crp/Fnr family  25.41 
 
 
229 aa  69.3  0.00000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  25.56 
 
 
228 aa  67.8  0.0000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  20.99 
 
 
238 aa  67  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  26.74 
 
 
251 aa  65.1  0.0000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_005957  BT9727_0345  Crp family transcriptional regulator  22.7 
 
 
229 aa  64.3  0.000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.254354  n/a   
 
 
-
 
NC_011725  BCB4264_A0424  transcriptional regulator, Crp family  22.75 
 
 
229 aa  64.3  0.000000001  Bacillus cereus B4264  Bacteria  hitchhiker  0.00556747  n/a   
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  20.44 
 
 
238 aa  63.9  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_011773  BCAH820_0411  transcriptional regulator, Crp family  22.7 
 
 
229 aa  63.5  0.000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000553573 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  22.56 
 
 
243 aa  63.5  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0681  Crp/FNR family transcriptional regulator  24.21 
 
 
234 aa  63.5  0.000000002  Polaromonas sp. JS666  Bacteria  normal  0.0670228  normal  0.546641 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.37 
 
 
229 aa  63.9  0.000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011772  BCG9842_B4894  transcriptional regulator, Crp family  22.16 
 
 
229 aa  63.9  0.000000002  Bacillus cereus G9842  Bacteria  normal  0.0770605  normal  0.372037 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  24.16 
 
 
248 aa  62.8  0.000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011901  Tgr7_2797  cAMP-regulatory protein  25.38 
 
 
198 aa  62.4  0.000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.207531  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  25.39 
 
 
354 aa  62  0.000000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_003909  BCE_0477  Crp family transcriptional regulator  22.16 
 
 
229 aa  61.6  0.000000007  Bacillus cereus ATCC 10987  Bacteria  normal  0.0933534  n/a   
 
 
-
 
NC_009674  Bcer98_0352  CRP/FNR family transcriptional regulator  22.7 
 
 
229 aa  61.6  0.000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0528  transcriptional regulator, Crp/Fnr family  26.34 
 
 
244 aa  60.1  0.00000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  24.71 
 
 
218 aa  60.5  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  25 
 
 
231 aa  60.1  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  23.35 
 
 
227 aa  60.1  0.00000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  25.79 
 
 
244 aa  60.5  0.00000002  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  25 
 
 
220 aa  60.5  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  22.91 
 
 
235 aa  59.7  0.00000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  25.39 
 
 
224 aa  59.3  0.00000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  24.84 
 
 
212 aa  59.3  0.00000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  25.97 
 
 
226 aa  58.5  0.00000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008576  Mmc1_1531  Crp/FNR family transcriptional regulator  22.73 
 
 
239 aa  58.5  0.00000006  Magnetococcus sp. MC-1  Bacteria  normal  0.169257  normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25.82 
 
 
241 aa  58.2  0.00000008  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.72 
 
 
234 aa  57.4  0.0000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  27.41 
 
 
222 aa  57.4  0.0000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  26.52 
 
 
238 aa  57.8  0.0000001  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3903  transcriptional regulator, Crp/Fnr family  23.5 
 
 
225 aa  57.8  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000947161  n/a   
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  25.26 
 
 
244 aa  57  0.0000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  24.73 
 
 
230 aa  57  0.0000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008261  CPF_0336  cyclic nucleotide-binding domain-containing protein  25 
 
 
223 aa  56.6  0.0000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0158598  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  18.58 
 
 
236 aa  57  0.0000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  23.68 
 
 
244 aa  56.2  0.0000003  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  24.74 
 
 
244 aa  56.2  0.0000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  23.68 
 
 
244 aa  56.2  0.0000003  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  21.47 
 
 
247 aa  55.8  0.0000004  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  23.68 
 
 
244 aa  55.8  0.0000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_2465  transcriptional regulator, Crp/Fnr family  22.53 
 
 
218 aa  55.8  0.0000004  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.07605e-19  n/a   
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  23.68 
 
 
244 aa  55.8  0.0000004  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  24.87 
 
 
244 aa  55.5  0.0000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  22.51 
 
 
243 aa  55.5  0.0000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  23.78 
 
 
244 aa  55.5  0.0000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  23.78 
 
 
244 aa  55.5  0.0000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  23.08 
 
 
237 aa  55.1  0.0000007  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  21.93 
 
 
227 aa  55.1  0.0000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  24.46 
 
 
222 aa  55.1  0.0000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  24.46 
 
 
222 aa  55.1  0.0000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  28.79 
 
 
219 aa  55.1  0.0000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_007336  Reut_C5944  cyclic nucleotide-binding  24.12 
 
 
228 aa  55.1  0.0000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  20.53 
 
 
227 aa  54.7  0.0000009  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  24.74 
 
 
244 aa  54.3  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  21.74 
 
 
233 aa  54.3  0.000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  21.72 
 
 
230 aa  54.3  0.000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  21.93 
 
 
227 aa  54.3  0.000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  21.74 
 
 
233 aa  54.3  0.000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  22.05 
 
 
228 aa  54.7  0.000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  21.72 
 
 
230 aa  53.5  0.000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  21.72 
 
 
230 aa  53.5  0.000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  21.72 
 
 
230 aa  53.5  0.000002  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  21.83 
 
 
231 aa  53.9  0.000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  21.72 
 
 
226 aa  53.5  0.000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2580  Crp/FNR family transcriptional regulator  23.78 
 
 
231 aa  53.1  0.000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.117752 
 
 
-
 
NC_011149  SeAg_B4136  cyclic nucleotide-binding domain protein  21.81 
 
 
233 aa  53.5  0.000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4447  CRP/FNR family transcriptional regulator  25.86 
 
 
227 aa  53.9  0.000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  21.72 
 
 
230 aa  53.5  0.000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4121  cyclic nucleotide-binding domain protein  21.81 
 
 
263 aa  53.9  0.000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  25.13 
 
 
236 aa  53.5  0.000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  21.72 
 
 
230 aa  53.9  0.000002  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_008700  Sama_2685  cAMP-binding protein  22.4 
 
 
272 aa  53.5  0.000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  21.72 
 
 
230 aa  53.5  0.000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_1697  transcriptional regulator, Crp/Fnr family  24.42 
 
 
259 aa  53.1  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.314621  hitchhiker  0.0000199045 
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  27.64 
 
 
220 aa  53.1  0.000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3326  Crp/FNR family transcriptional regulator  23.37 
 
 
239 aa  53.1  0.000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0702  cyclic nucleotide-binding protein  23.2 
 
 
233 aa  53.1  0.000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  26.04 
 
 
232 aa  53.1  0.000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24.32 
 
 
229 aa  52.8  0.000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  25 
 
 
224 aa  52.8  0.000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_008687  Pden_3468  CRP/FNR family transcriptional regulator  21.31 
 
 
236 aa  53.1  0.000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
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