More than 300 homologs were found in PanDaTox collection
for query gene CPR_2531 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_2531  cyclic nucleotide-binding domain-containing protein  100 
 
 
226 aa  450  1.0000000000000001e-126  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2845  cyclic nucleotide-binding domain-containing protein  96.9 
 
 
226 aa  440  1e-123  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1171  cyclic nucleotide-binding protein  36.36 
 
 
226 aa  155  4e-37  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00521884  n/a   
 
 
-
 
NC_011898  Ccel_1360  transcriptional regulator, Crp/Fnr family  30.47 
 
 
235 aa  124  1e-27  Clostridium cellulolyticum H10  Bacteria  normal  0.990851  n/a   
 
 
-
 
NC_011883  Ddes_1827  transcriptional regulator, Crp/Fnr family  32.13 
 
 
229 aa  115  6.9999999999999995e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2221  transcriptional regulator, Crp/Fnr family  30.73 
 
 
240 aa  113  2.0000000000000002e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.181319  n/a   
 
 
-
 
NC_010003  Pmob_1162  Crp/FNR family transcriptional regulator  31.88 
 
 
220 aa  107  1e-22  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2189  hypothetical protein  31.55 
 
 
219 aa  102  4e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0895568  n/a   
 
 
-
 
NC_009718  Fnod_1303  CRP/FNR family transcriptional regulator  26.03 
 
 
229 aa  99  6e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01090  transcriptional regulator, crp family  30.43 
 
 
224 aa  97.4  1e-19  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0034  cyclic nucleotide-binding protein  30.05 
 
 
219 aa  97.1  2e-19  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000350916  n/a   
 
 
-
 
NC_010001  Cphy_3149  cyclic nucleotide-binding protein  29.05 
 
 
238 aa  95.5  6e-19  Clostridium phytofermentans ISDg  Bacteria  normal  0.192306  n/a   
 
 
-
 
NC_013204  Elen_0213  transcriptional regulator, Crp/Fnr family  25.7 
 
 
224 aa  92.8  4e-18  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.91 
 
 
226 aa  92.4  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_002967  TDE0478  cyclic nucleotide binding domain-containing protein  31.63 
 
 
216 aa  91.7  9e-18  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  30.05 
 
 
224 aa  91.3  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011898  Ccel_1423  cyclic nucleotide-binding protein  26.07 
 
 
222 aa  90.5  2e-17  Clostridium cellulolyticum H10  Bacteria  normal  0.0243241  n/a   
 
 
-
 
NC_011830  Dhaf_0705  cyclic nucleotide-binding protein  25.24 
 
 
227 aa  86.7  3e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0702  cyclic nucleotide-binding protein  25.71 
 
 
233 aa  85.9  5e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1053  transcriptional regulator, putative  27.55 
 
 
228 aa  85.5  6e-16  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0216294 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.89 
 
 
226 aa  85.1  7e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  23.66 
 
 
225 aa  84  0.000000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.02 
 
 
248 aa  84  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  26.51 
 
 
253 aa  83.6  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_013171  Apre_1580  transcriptional regulator, Crp/Fnr family  32.27 
 
 
215 aa  83.2  0.000000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0911  cyclic nucleotide-binding protein  26.73 
 
 
226 aa  82.8  0.000000000000004  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000610478  hitchhiker  0.00000000000000386547 
 
 
-
 
NC_013517  Sterm_3951  putative transcriptional regulator, Crp/Fnr family  27.09 
 
 
220 aa  82.4  0.000000000000005  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  26.7 
 
 
229 aa  81.6  0.000000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  25.68 
 
 
232 aa  81.3  0.00000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.57 
 
 
227 aa  80.5  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_013203  Apar_0741  transcriptional regulator, Crp/Fnr family  27.45 
 
 
222 aa  80.5  0.00000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  0.343914  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  25.57 
 
 
227 aa  80.1  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_1578  CRP/FNR family transcriptional regulator  28.49 
 
 
201 aa  80.9  0.00000000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_05960  cAMP-binding protein  27.49 
 
 
215 aa  79.3  0.00000000000004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.901982 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  23.42 
 
 
249 aa  79.3  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  23.53 
 
 
227 aa  78.6  0.00000000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  24.2 
 
 
233 aa  77.4  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  24.12 
 
 
241 aa  76.6  0.0000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.77 
 
 
225 aa  76.6  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  28.84 
 
 
236 aa  75.9  0.0000000000005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_014150  Bmur_2465  transcriptional regulator, Crp/Fnr family  27.36 
 
 
218 aa  75.5  0.0000000000006  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  2.07605e-19  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  28.84 
 
 
236 aa  75.5  0.0000000000006  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  27.4 
 
 
234 aa  75.1  0.0000000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009616  Tmel_0756  CRP/FNR family transcriptional regulator  25.13 
 
 
220 aa  75.1  0.0000000000008  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2778  transcriptional regulator, Crp/Fnr family  24.06 
 
 
238 aa  73.9  0.000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0529131  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  24.09 
 
 
230 aa  73.9  0.000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  23.66 
 
 
227 aa  73.9  0.000000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2472  transcriptional regulator, Crp/Fnr family  23.66 
 
 
238 aa  73.6  0.000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.3707  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25.24 
 
 
229 aa  73.6  0.000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  24.55 
 
 
229 aa  73.6  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1644  Crp/FNR family transcriptional regulator  26.49 
 
 
200 aa  73.2  0.000000000003  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3903  transcriptional regulator, Crp/Fnr family  26.03 
 
 
225 aa  72.8  0.000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000947161  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  18.55 
 
 
232 aa  72.4  0.000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  20.45 
 
 
231 aa  72  0.000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  24.11 
 
 
237 aa  72  0.000000000008  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_009707  JJD26997_1473  putative transcriptional regulator  33.85 
 
 
198 aa  71.2  0.00000000001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0168255  n/a   
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  23.11 
 
 
236 aa  71.2  0.00000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  25.34 
 
 
229 aa  70.1  0.00000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3735  transcriptional regulator, Crp/Fnr family  28.81 
 
 
210 aa  70.5  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  26.34 
 
 
246 aa  70.1  0.00000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  23.08 
 
 
225 aa  70.1  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  22.58 
 
 
238 aa  69.7  0.00000000004  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  25.57 
 
 
243 aa  69.3  0.00000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  18.27 
 
 
232 aa  69.7  0.00000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  27.17 
 
 
230 aa  68.9  0.00000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  27.17 
 
 
229 aa  69.3  0.00000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  18.27 
 
 
232 aa  69.3  0.00000000005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  27.17 
 
 
230 aa  68.9  0.00000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  27.17 
 
 
229 aa  69.3  0.00000000005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  22.28 
 
 
254 aa  69.3  0.00000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  27.17 
 
 
229 aa  69.3  0.00000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  27.17 
 
 
230 aa  68.9  0.00000000005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  27.17 
 
 
230 aa  68.9  0.00000000005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_009636  Smed_2376  CRP/FNR family transcriptional regulator  25.11 
 
 
226 aa  69.3  0.00000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.253524 
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  26.61 
 
 
225 aa  69.3  0.00000000005  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  26.76 
 
 
229 aa  68.9  0.00000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  27.57 
 
 
352 aa  68.2  0.00000000009  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  27.52 
 
 
230 aa  68.2  0.00000000009  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  22.67 
 
 
227 aa  67.8  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.58 
 
 
236 aa  67.8  0.0000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  26.77 
 
 
225 aa  67.4  0.0000000002  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1398  cyclic nucleotide-binding protein  28.68 
 
 
157 aa  67.4  0.0000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.908167  normal 
 
 
-
 
NC_009092  Shew_3233  Crp/FNR family transcriptional regulator  27.17 
 
 
256 aa  67.4  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  26.77 
 
 
225 aa  67.4  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.39 
 
 
236 aa  67  0.0000000002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  22.52 
 
 
229 aa  67.4  0.0000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_003912  CJE0516  putative transcriptional regulator  33.85 
 
 
198 aa  66.6  0.0000000003  Campylobacter jejuni RM1221  Bacteria  normal  0.635671  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  24.42 
 
 
239 aa  66.6  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  26.15 
 
 
225 aa  66.6  0.0000000003  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_011883  Ddes_0528  transcriptional regulator, Crp/Fnr family  25.91 
 
 
244 aa  66.2  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  24.48 
 
 
354 aa  65.9  0.0000000005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  27.47 
 
 
221 aa  65.9  0.0000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  21.23 
 
 
227 aa  65.1  0.0000000008  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  23.71 
 
 
235 aa  65.1  0.0000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25.24 
 
 
247 aa  64.7  0.000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  22.86 
 
 
231 aa  64.7  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  22.94 
 
 
227 aa  64.7  0.000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013170  Ccur_03090  cAMP-binding protein  25 
 
 
227 aa  64.3  0.000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.0333204  hitchhiker  1.31136e-22 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  24.09 
 
 
222 aa  64.3  0.000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  25.12 
 
 
230 aa  64.3  0.000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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