More than 300 homologs were found in PanDaTox collection
for query gene VEA_001273 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  100 
 
 
638 aa  1285    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  89.03 
 
 
650 aa  1103    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  71.79 
 
 
638 aa  919    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  51.56 
 
 
638 aa  625  1e-178  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  49.77 
 
 
638 aa  609  1e-173  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  49.77 
 
 
638 aa  608  1e-173  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  50.7 
 
 
639 aa  605  9.999999999999999e-173  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  52.43 
 
 
638 aa  607  9.999999999999999e-173  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
638 aa  607  9.999999999999999e-173  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  50.71 
 
 
636 aa  605  9.999999999999999e-173  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  51.65 
 
 
642 aa  602  1.0000000000000001e-171  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  51.96 
 
 
638 aa  605  1.0000000000000001e-171  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
641 aa  589  1e-167  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
638 aa  590  1e-167  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
638 aa  591  1e-167  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
638 aa  590  1e-167  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  51.33 
 
 
638 aa  585  1e-166  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  49.84 
 
 
636 aa  587  1e-166  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  42.32 
 
 
636 aa  494  9.999999999999999e-139  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0604  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
641 aa  394  1e-108  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.471742  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
640 aa  342  2e-92  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
645 aa  337  5e-91  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  34.31 
 
 
645 aa  332  9e-90  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
645 aa  328  1.0000000000000001e-88  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
645 aa  327  5e-88  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
640 aa  327  5e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  32.24 
 
 
641 aa  326  8.000000000000001e-88  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
645 aa  318  1e-85  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
643 aa  303  5.000000000000001e-81  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.74 
 
 
630 aa  298  2e-79  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  53.72 
 
 
548 aa  297  5e-79  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  38.56 
 
 
632 aa  295  2e-78  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  37.99 
 
 
632 aa  292  1e-77  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  38.34 
 
 
629 aa  283  7.000000000000001e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  35.36 
 
 
629 aa  283  9e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  30.87 
 
 
648 aa  281  2e-74  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  37.2 
 
 
630 aa  280  5e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  35.36 
 
 
629 aa  280  5e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.13 
 
 
624 aa  277  4e-73  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  37.91 
 
 
624 aa  277  5e-73  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  37.91 
 
 
624 aa  276  9e-73  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.2 
 
 
628 aa  275  1.0000000000000001e-72  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
625 aa  274  5.000000000000001e-72  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
628 aa  273  8.000000000000001e-72  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  34.63 
 
 
643 aa  273  9e-72  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.47 
 
 
624 aa  272  1e-71  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
548 aa  272  2e-71  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  37.17 
 
 
629 aa  270  5.9999999999999995e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
637 aa  269  1e-70  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  36.01 
 
 
629 aa  269  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  35.73 
 
 
629 aa  269  1e-70  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  30.84 
 
 
648 aa  268  2e-70  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
638 aa  268  2.9999999999999995e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.99 
 
 
626 aa  266  8.999999999999999e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.84 
 
 
626 aa  261  2e-68  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  42.64 
 
 
519 aa  260  6e-68  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
548 aa  259  8e-68  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  35.55 
 
 
626 aa  258  2e-67  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.18 
 
 
626 aa  258  2e-67  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  38.42 
 
 
549 aa  252  1e-65  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  42.67 
 
 
634 aa  253  1e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  35.61 
 
 
629 aa  252  1e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
634 aa  253  1e-65  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  34.9 
 
 
629 aa  251  2e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.75 
 
 
559 aa  251  3e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
634 aa  250  7e-65  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  44.05 
 
 
637 aa  248  2e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
541 aa  248  2e-64  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
630 aa  249  2e-64  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
630 aa  247  4e-64  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
630 aa  247  6e-64  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  30.91 
 
 
648 aa  244  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  35.93 
 
 
630 aa  244  3.9999999999999997e-63  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
541 aa  244  3.9999999999999997e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  33.7 
 
 
628 aa  243  7.999999999999999e-63  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.93 
 
 
630 aa  243  7.999999999999999e-63  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
630 aa  243  9e-63  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
630 aa  242  1e-62  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
630 aa  242  1e-62  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
674 aa  241  2e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  37.3 
 
 
713 aa  241  2.9999999999999997e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.89 
 
 
545 aa  241  4e-62  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.36 
 
 
632 aa  240  6.999999999999999e-62  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
541 aa  239  8e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
545 aa  239  1e-61  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.01 
 
 
712 aa  239  1e-61  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  41.02 
 
 
545 aa  238  2e-61  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
630 aa  239  2e-61  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2347  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
545 aa  238  2e-61  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2463  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
545 aa  238  2e-61  Shewanella baltica OS195  Bacteria  normal  0.0650014  normal  0.35347 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
716 aa  238  2e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.92 
 
 
646 aa  238  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
543 aa  238  3e-61  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
636 aa  238  4e-61  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
543 aa  238  4e-61  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
564 aa  237  5.0000000000000005e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  33.62 
 
 
628 aa  236  6e-61  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  41.32 
 
 
540 aa  236  7e-61  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
545 aa  236  8e-61  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.2 
 
 
646 aa  236  1.0000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
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