More than 300 homologs were found in PanDaTox collection
for query gene SO_2083 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  83.4 
 
 
506 aa  853    Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  100 
 
 
505 aa  1020    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  83.6 
 
 
506 aa  855    Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  83 
 
 
506 aa  851    Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  66.14 
 
 
500 aa  637    Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  83.2 
 
 
506 aa  852    Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  67.32 
 
 
501 aa  660    Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  88.71 
 
 
505 aa  915    Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  68.69 
 
 
500 aa  669    Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  88.71 
 
 
505 aa  911    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  82.18 
 
 
502 aa  840    Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  88.71 
 
 
505 aa  911    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  67.91 
 
 
504 aa  681    Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  64.36 
 
 
499 aa  620  1e-176  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  40.67 
 
 
467 aa  329  8e-89  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  39.53 
 
 
472 aa  319  7e-86  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
484 aa  309  8e-83  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
484 aa  308  1.0000000000000001e-82  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
484 aa  307  3e-82  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
484 aa  307  3e-82  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  39.69 
 
 
467 aa  303  6.000000000000001e-81  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
484 aa  300  5e-80  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
482 aa  298  2e-79  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
484 aa  297  3e-79  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
484 aa  297  3e-79  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
482 aa  296  8e-79  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  38.17 
 
 
479 aa  288  2e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
482 aa  284  3.0000000000000004e-75  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  37.4 
 
 
480 aa  284  3.0000000000000004e-75  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  37.3 
 
 
473 aa  283  4.0000000000000003e-75  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  39.8 
 
 
482 aa  282  8.000000000000001e-75  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
467 aa  277  4e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  39.4 
 
 
484 aa  276  5e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  46.27 
 
 
476 aa  276  6e-73  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  37.06 
 
 
488 aa  276  6e-73  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
479 aa  275  2.0000000000000002e-72  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
481 aa  271  2e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  46.31 
 
 
478 aa  269  8.999999999999999e-71  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  45 
 
 
481 aa  265  2e-69  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
479 aa  255  1.0000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
533 aa  206  8e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0410  methyl-accepting chemotaxis sensory transducer  35.83 
 
 
538 aa  203  6e-51  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  38.26 
 
 
536 aa  203  7e-51  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  40.29 
 
 
713 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
533 aa  198  2.0000000000000003e-49  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.29 
 
 
637 aa  198  2.0000000000000003e-49  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.63 
 
 
533 aa  198  2.0000000000000003e-49  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  37.5 
 
 
629 aa  196  7e-49  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
634 aa  194  2e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.49 
 
 
559 aa  195  2e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
638 aa  195  2e-48  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
640 aa  194  3e-48  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  40.91 
 
 
623 aa  194  4e-48  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.66 
 
 
712 aa  193  5e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  38.37 
 
 
712 aa  193  6e-48  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  36.86 
 
 
629 aa  193  7e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  37 
 
 
634 aa  192  1e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  37.96 
 
 
634 aa  192  1e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  37.18 
 
 
629 aa  192  1e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  37.18 
 
 
632 aa  191  2e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  33.59 
 
 
629 aa  191  2.9999999999999997e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
533 aa  191  2.9999999999999997e-47  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.23 
 
 
637 aa  191  4e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  37.06 
 
 
640 aa  190  5.999999999999999e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.73 
 
 
629 aa  190  7e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
639 aa  189  8e-47  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  41.11 
 
 
623 aa  189  9e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  36.86 
 
 
632 aa  189  1e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
638 aa  188  2e-46  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
638 aa  188  2e-46  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  38.35 
 
 
640 aa  188  2e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  36.65 
 
 
548 aa  188  2e-46  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
638 aa  187  4e-46  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
560 aa  187  5e-46  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
541 aa  186  8e-46  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  35.01 
 
 
568 aa  186  1.0000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  32.9 
 
 
773 aa  186  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
622 aa  184  2.0000000000000003e-45  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
634 aa  185  2.0000000000000003e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  33.95 
 
 
546 aa  184  3e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.18 
 
 
626 aa  184  4.0000000000000006e-45  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
716 aa  184  4.0000000000000006e-45  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  36.31 
 
 
539 aa  184  4.0000000000000006e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  38.07 
 
 
640 aa  184  4.0000000000000006e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
636 aa  183  5.0000000000000004e-45  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  36.31 
 
 
539 aa  183  6e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  36.48 
 
 
629 aa  183  7e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  37.14 
 
 
653 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
628 aa  182  1e-44  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  38.1 
 
 
643 aa  181  2e-44  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.1 
 
 
628 aa  181  2e-44  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  36.97 
 
 
653 aa  181  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.15 
 
 
549 aa  181  2.9999999999999997e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
547 aa  181  2.9999999999999997e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
658 aa  180  4e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  37.04 
 
 
627 aa  180  4.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
625 aa  180  4.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  36.83 
 
 
541 aa  180  4.999999999999999e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.99 
 
 
645 aa  179  7e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  34.65 
 
 
570 aa  179  8e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
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