| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1416 |
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| Symbol | |
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| ID | 4277914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1688863 |
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| End bp | 1690308 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134190 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_750106 |
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| Protein GI | 114562593 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.493152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAA TCCAGTTTAG AAAAATTGAT GCCATTATGA TTAAGTTCAG CCTTAATGGT
AAGTTTTGGA TTGTTTGTTC AATGGTCGCC GCGATTACAA GTATTATCGC GATATTGAAT
TTCCAACAAG CTAATGATTT AATTACTCAA TCATCTTTAG ACCGAGTGAG CACTCGTGTG
CAAAGTGTTG CCTCAGTGGC AAACAGTCAA GGATTACAAA ACGCCGAGCT TCAACAATTT
GCTGCCGATA ACCAACTGCA AGTGTCTGCA AGGGATGAGA GTACTCGCAG TGGCGATATA
GTGACAGCAT CTGCCAATGT GGGTAATCAA TATTTAACTC AAAGCCAAAA TGTCCAGCAG
TGGGAACAAG ACGCGATTGG CAATGCCCAA TTTATGCTCA TCATTGCGCT GGTGGGATTA
TTGCCACTAT TTCAATTAAG TTATTGGATT TCTACGTCAT TAGGCGGCGG GTTATGGGAA
ATGTACATGG CCATTAAACG CCTCGCTGAC GGTGACTTAA CCTTTAGACT TAACTTTTTT
GGTACTGATG ATTTCAGTTT AATCGCCAAA GACATTGATC GTTGTGCTGA CAACATGAGT
GAAATGGTTG GTGCTATCCG TAGCAATGCT GAAACCTTGG CTGTTGCTGG CAACGAGTTT
AATCATCAAG CCAGTACCAA TGACGAACTG ATAGATCAAC AACATCACTT TTTAGACTCA
GTGGCGCATG CCATGGATCA AATGACCGCG GCTATAGCCG ATGTGTCACA TCACGCAAGT
GATACGTCAT TAAATACTAA GCAAAATGCA ACGCAAATAG AGCAAAGTCA AAGTAAGATT
AACGATGCGG TTAAACGTAT TAGTTACCTA TCTGAGCGTA TTGCAGAAGC ATTTTCATCA
GTAGAGCAAC TTTCTCGTGA TGCTACCCAA ATTAATGATG CCGTTACCAC CATTGATAGT
ATTTCTGAAC AAACCAATTT ATTGGCATTA AATGCCGCCA TTGAAGCGGC ACGTGCCGGT
GAGCAAGGTC GTGGTTTTGC TGTCGTGGCG GACGAAGTGC GTACCCTTGC GGGGCGTACC
CAAAAAGCCA CCGTAGAAAT TCAAAAAATG ATTGAAGGGT TGCAACAAGG CTCTAAAAAG
CTGACCGGTA TTACCAATGT GATTGTTACT GAAGCAGACC AAGGGAGTGC GAGTATCAAA
GCGGTGGGTG ATGATATTAC TCATATGGCA GAGTCTATTA ATGCGGTGTT CGATATGAGC
AGCCAAATAG CAGCATCCGC GGAACAACAA AGCATGTCTG CAAGGGATAT AGCCTCACAA
CTTAATCAAA TTCGTCATCA ATCGGAAACG ATTCGCAGTA CTTCCAAACA AGCTGGTGTA
TTAGCTAAAG ATTTGAATCA ATCATCTAAA GGTTTAGCGG CGATTTTAAG TCAATATAGA
ATCTAG
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| Protein sequence | MKQIQFRKID AIMIKFSLNG KFWIVCSMVA AITSIIAILN FQQANDLITQ SSLDRVSTRV
QSVASVANSQ GLQNAELQQF AADNQLQVSA RDESTRSGDI VTASANVGNQ YLTQSQNVQQ
WEQDAIGNAQ FMLIIALVGL LPLFQLSYWI STSLGGGLWE MYMAIKRLAD GDLTFRLNFF
GTDDFSLIAK DIDRCADNMS EMVGAIRSNA ETLAVAGNEF NHQASTNDEL IDQQHHFLDS
VAHAMDQMTA AIADVSHHAS DTSLNTKQNA TQIEQSQSKI NDAVKRISYL SERIAEAFSS
VEQLSRDATQ INDAVTTIDS ISEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAGRT
QKATVEIQKM IEGLQQGSKK LTGITNVIVT EADQGSASIK AVGDDITHMA ESINAVFDMS
SQIAASAEQQ SMSARDIASQ LNQIRHQSET IRSTSKQAGV LAKDLNQSSK GLAAILSQYR
I
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