| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3719 |
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| Symbol | |
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| ID | 4280612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4416962 |
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| End bp | 4418401 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136532 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_752385 |
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| Protein GI | 114564871 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0481837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG TTGATTTCAG AACTATCGAT AAACTTTTCA TCAAAATGTC CATTAATGAT
AAATTTTGGG CTATTTTCGG ACTGTTCCTG ATCATTTTAT CAAGTGTATC GATTAGTAGT
TACTTTAGTA AAATTGAAAA TATTGAACAG CAATCGTTAC ATGTTTTAGA ACAAAAAACC
GCTGCTACTG TCCAAGCTCT TGAGGCGACA AGTCAGCTAG ACCAAGCTTC AAACTTAGGT
TTGCAAGTCT CAGGTCGTTC GCAAACCAGT TCACGCCAAC AAGATACTAT TACCGCCGTG
TATGCATTAG ATGGCCAATA TTATACATTG AGCGAATCAG TTTCTGGACA AGAAGCCAAT
GCTAAACAAG CTGCATTAAT GTCACTGCTA ATGTCATTCT TATGGATAAT ACCTTTTGCA
GTAGTGATTT ACTGGACAGC AACTTTCCTT GGTGGTGCAC TTTGGGTGTT ATGGGATACC
ACGGAAAAAA TTGCTAAAGG AGATTTAACT TCTCGTTTAG GTTTCCATCC TGGCCGTGAT
GAATTCGGTA CCATTGGTTG TGCACTCGAT AAAGCCATGG ATACATTGAC CGAGCTCGTT
GTTGCAGTGA AAAAAAGTGC CGATACCTTG CAAACGACCT CCAGTTCATT TGCCAATGAC
GCAGTGCAAA GCGCGGAACA AATTGATTTA CAATATGCTT CACTTGACTC AGTTGCTACA
GCAATGGAAG AAATGACGGC ATCAGCTGCC GAAGTATCTA ATATCGCTCG AAATTCAACT
CAACGCGTTG AGCAAGATTC TGAGTATACA CGTCAGAGTT ATGACCGAGC TAAGCGGGCG
ATTAATGAAA TTAAGCAGTT ATCGACCTAC ATTGAACAAA CATCAAATTC GGTCAATACC
CTAAAAATTA ATGCGACTAA TATTAATGAA GTGATCACCA CCATTAATGC TATTTCAGAT
CAAACTAACT TACTGGCATT AAACGCAGCA ATTGAAGCGG CACGTGCAGG TGAAATGGGC
CGTGGTTTTG CGGTGGTTGC TGACGAAGTA AGAACCCTTG CGGGTCGTAC ACAAGCTGCG
ACGGTTGAAA TTCATAAAAT GATTGAATTA CTGCAAAGTG AAACGCTCAA TATTGACAGC
ATTACTCAAG ATACCGTCAA ACAAGCACAA ACCAGTAGCG ACCTAATCAC TAATATTGGA
ACCGATATTA ATGCCATTTC TGAATCAGCA AATTCAATTA TGGACATGAG TTTCCAAATT
TCTACATCGT CAGAAGAACA AAGTGCAGTG GCCAATGACA TTGCAAAAGA GCTGACTGAC
ATAAGACAGA AATCAAATAT TATTAGAGGT TTATCGCAAC AGTCTTCAAG TGGTGTTAAA
GATCTTGCAA AAGCATCAGC AGATTTGGGT AAAATTCTTA GTCAATACCG TACTAATTAA
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| Protein sequence | MKQVDFRTID KLFIKMSIND KFWAIFGLFL IILSSVSISS YFSKIENIEQ QSLHVLEQKT
AATVQALEAT SQLDQASNLG LQVSGRSQTS SRQQDTITAV YALDGQYYTL SESVSGQEAN
AKQAALMSLL MSFLWIIPFA VVIYWTATFL GGALWVLWDT TEKIAKGDLT SRLGFHPGRD
EFGTIGCALD KAMDTLTELV VAVKKSADTL QTTSSSFAND AVQSAEQIDL QYASLDSVAT
AMEEMTASAA EVSNIARNST QRVEQDSEYT RQSYDRAKRA INEIKQLSTY IEQTSNSVNT
LKINATNINE VITTINAISD QTNLLALNAA IEAARAGEMG RGFAVVADEV RTLAGRTQAA
TVEIHKMIEL LQSETLNIDS ITQDTVKQAQ TSSDLITNIG TDINAISESA NSIMDMSFQI
STSSEEQSAV ANDIAKELTD IRQKSNIIRG LSQQSSSGVK DLAKASADLG KILSQYRTN
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