| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2471 |
|---|
| Symbol | |
|---|
| ID | 5662864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3014768 |
|---|
| End bp | 3016267 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641237097 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001502326 |
|---|
| Protein GI | 157962292 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG AAGTTAAGTT CCGCTGGGTG GATAAATACC TTATCCACAT GACACTTAAA
ACAAAGTTTG CATTATTAGC TATAATCCCC ATCATCACCC TCTTAGGTTT ATCAGCGTTG
CTAAACAGCG AGTACAGACA AAACCTACTC GATAGCCAAG TCACTCAAAC CCATGAATTC
AACCAGACGT TCAATGAAGC ACTCAACGTT GCCTATCAAT ATATTCCCGA AGAAAACAAG
CAGGCATTCT TGGGTGCCAT ACAAGGCAAA CTGTCTATCT ATCAACAGCA AAATGCGCCC
CATCAATTAA CGGCTATCGC CGCTAAAGGC GGTGAAGCTA ATATCACAGG GGATAAGATC
GAAAGTGTCA GCTCTAGTGG CTCACAAGGC ATCATTACCG TGTTAAGCAC AGAGCAAAAT
ACTAGCAGTC ATAATGAATA TCTGGCCTAT GTTGCAACCA GCCTATTGAT CTTGATTATC
CTTATAGTCA GTTACTATAT TTCAAGTTTT GTTGGCGGCG CACTTTACAC CAATGTCATG
GCACTAAAGA GAGCTGCTGA GGGTGATTTA ACCGGTCGGC TTAACTTTTT TGAAGTAAAA
GATGAATTCA GTATCCTTGC AATAAGCATA GATACCTTGG TCGAGCGTCA ACATAAACTC
GTTAGCGAAG TCACTAACGC CAGCTTACAA ATTCGCAATG TAGTTCAAGC CTTTAGAAAT
ACTGCAGAGG AAGGACAATC TTTAGCAATG AATCAGCGCC AGCATATCGA CTCATTAGCA
ACGGCTATGG AACAGATGAC AGCCGCGGTA TCAGAAGTCG CTCGTAATGC TGAGTTGTCT
TCCACTGAAA CCCAAGAAGC CAATATCCAG GTCGATGCAG GCTCTCGAGA TATCGCCATT
ACAGTTGAAG CGATTGGTGG ATTAGCGATG GAAATTGGCG ATGCCTCTGA AGCGGTAAAC
CAGCTCAATG AAAATGCCGC AAAAATTGAT GAAGTGGTCT CCACAATTAA TGCTATTTCT
GAGCAGACTA ACTTATTAGC CTTGAATGCA GCCATTGAGG CGGCGCGAGC GGGTGAACAA
GGCCGTGGAT TTGCAGTAGT CGCCGATGAG GTTAGAACCC TTGCAGGTCG AACTCAAGCT
GCAACTGTTG AGATAAAAAC CATGATTGAA GCACTACAAT CCGGGGCCCG TAACCTCAAG
CAAGTCATGC ATCGCACCGT AGAAAAAGCC GAAGAAGGTA AGAAGCATGT ACTCGATACG
GGAAAAGACT TGGAAGGCAT TGCTCACCAT AGCGCCAAAG TCTTCGAAAT GAGTGAGTTG
ATTGCCACAT CAGCCGAAGA GCAGTCCTCT GTCGCAAACG AGATAGCCAC CAATCTTATG
GGTATTCGCA ATCAATCTCA CGATGTAGAA CAATCTGCAA ATCAGTCGGT ATCAAGCTGT
AATGAACTGC ATGCAACTGC CGAACAGCTG GATAAACTGC TTATTGGCTT AAAGGTCTAG
|
|---|
| Protein sequence | MMKEVKFRWV DKYLIHMTLK TKFALLAIIP IITLLGLSAL LNSEYRQNLL DSQVTQTHEF
NQTFNEALNV AYQYIPEENK QAFLGAIQGK LSIYQQQNAP HQLTAIAAKG GEANITGDKI
ESVSSSGSQG IITVLSTEQN TSSHNEYLAY VATSLLILII LIVSYYISSF VGGALYTNVM
ALKRAAEGDL TGRLNFFEVK DEFSILAISI DTLVERQHKL VSEVTNASLQ IRNVVQAFRN
TAEEGQSLAM NQRQHIDSLA TAMEQMTAAV SEVARNAELS STETQEANIQ VDAGSRDIAI
TVEAIGGLAM EIGDASEAVN QLNENAAKID EVVSTINAIS EQTNLLALNA AIEAARAGEQ
GRGFAVVADE VRTLAGRTQA ATVEIKTMIE ALQSGARNLK QVMHRTVEKA EEGKKHVLDT
GKDLEGIAHH SAKVFEMSEL IATSAEEQSS VANEIATNLM GIRNQSHDVE QSANQSVSSC
NELHATAEQL DKLLIGLKV
|
|---|
| |