More than 300 homologs were found in PanDaTox collection
for query gene Swoo_2947 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  79.46 
 
 
482 aa  756    Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  71.1 
 
 
482 aa  654    Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  100 
 
 
482 aa  964    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  67.36 
 
 
484 aa  624  1e-177  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  67.15 
 
 
484 aa  622  1e-177  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  67.36 
 
 
484 aa  624  1e-177  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  66.74 
 
 
484 aa  617  1e-175  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
484 aa  605  9.999999999999999e-173  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
484 aa  606  9.999999999999999e-173  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  65.98 
 
 
482 aa  603  1.0000000000000001e-171  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
484 aa  603  1.0000000000000001e-171  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  67.15 
 
 
484 aa  579  1e-164  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  60.29 
 
 
481 aa  554  1e-156  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  59.29 
 
 
479 aa  542  1e-153  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  60.08 
 
 
481 aa  515  1.0000000000000001e-145  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  42.32 
 
 
480 aa  344  2e-93  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  43.15 
 
 
478 aa  340  4e-92  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
479 aa  332  8e-90  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
479 aa  332  1e-89  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  41.48 
 
 
473 aa  332  1e-89  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  41.36 
 
 
476 aa  331  2e-89  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  42.04 
 
 
504 aa  327  3e-88  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
500 aa  324  2e-87  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  40.21 
 
 
488 aa  323  3e-87  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  39.72 
 
 
505 aa  315  1.9999999999999998e-84  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
505 aa  308  1.0000000000000001e-82  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  39.6 
 
 
505 aa  308  1.0000000000000001e-82  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
505 aa  308  2.0000000000000002e-82  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  40.96 
 
 
500 aa  306  5.0000000000000004e-82  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
506 aa  306  6e-82  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
506 aa  305  9.000000000000001e-82  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
506 aa  305  1.0000000000000001e-81  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
506 aa  305  1.0000000000000001e-81  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  40.08 
 
 
501 aa  301  2e-80  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
499 aa  292  1e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
502 aa  291  2e-77  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  39.96 
 
 
467 aa  269  8.999999999999999e-71  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  46.63 
 
 
472 aa  258  2e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  37.47 
 
 
467 aa  249  6e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
467 aa  239  9e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
568 aa  190  5e-47  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
525 aa  189  1e-46  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
527 aa  188  2e-46  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
646 aa  188  2e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  39.37 
 
 
637 aa  187  4e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  35.08 
 
 
527 aa  185  1.0000000000000001e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  34.26 
 
 
619 aa  186  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  36.81 
 
 
639 aa  186  1.0000000000000001e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
637 aa  186  1.0000000000000001e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
634 aa  183  5.0000000000000004e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  34.97 
 
 
653 aa  183  7e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  34.97 
 
 
643 aa  183  8.000000000000001e-45  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.03 
 
 
572 aa  182  1e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  31.9 
 
 
633 aa  181  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  34.99 
 
 
543 aa  182  2e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
552 aa  181  2.9999999999999997e-44  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
552 aa  181  2.9999999999999997e-44  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  35.99 
 
 
541 aa  181  2.9999999999999997e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
638 aa  180  4e-44  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  31.36 
 
 
527 aa  180  4e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  36.01 
 
 
533 aa  180  4e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
638 aa  180  5.999999999999999e-44  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
653 aa  180  5.999999999999999e-44  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
543 aa  180  5.999999999999999e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
638 aa  179  7e-44  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
527 aa  179  9e-44  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  35.16 
 
 
653 aa  178  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
658 aa  178  2e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
527 aa  178  2e-43  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.67 
 
 
533 aa  177  3e-43  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  36.19 
 
 
544 aa  177  3e-43  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
533 aa  177  3e-43  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
634 aa  176  6e-43  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
541 aa  176  6e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  34.38 
 
 
541 aa  176  7e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
638 aa  176  7e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  39.24 
 
 
541 aa  176  8e-43  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
541 aa  175  9.999999999999999e-43  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
640 aa  174  1.9999999999999998e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
638 aa  175  1.9999999999999998e-42  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  33.25 
 
 
546 aa  174  1.9999999999999998e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
543 aa  174  2.9999999999999996e-42  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
543 aa  174  2.9999999999999996e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
540 aa  174  3.9999999999999995e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  31.69 
 
 
634 aa  174  3.9999999999999995e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
543 aa  174  3.9999999999999995e-42  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
541 aa  173  5e-42  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
636 aa  173  5e-42  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  36.99 
 
 
679 aa  173  5.999999999999999e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
543 aa  173  6.999999999999999e-42  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  31.5 
 
 
541 aa  173  6.999999999999999e-42  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
541 aa  172  7.999999999999999e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.65 
 
 
629 aa  172  1e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
739 aa  172  1e-41  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009654  Mmwyl1_0410  methyl-accepting chemotaxis sensory transducer  34.68 
 
 
538 aa  172  1e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.62 
 
 
626 aa  171  2e-41  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  36.74 
 
 
640 aa  171  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
554 aa  171  2e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
543 aa  172  2e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
543 aa  171  3e-41  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
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