More than 300 homologs were found in PanDaTox collection
for query gene Sama_2140 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
479 aa  953    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
484 aa  617  1e-175  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  66.87 
 
 
484 aa  612  9.999999999999999e-175  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  66.87 
 
 
484 aa  613  9.999999999999999e-175  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  65.01 
 
 
484 aa  597  1e-169  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  65.01 
 
 
484 aa  597  1e-169  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  65.01 
 
 
484 aa  597  1e-169  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  64.8 
 
 
484 aa  593  1e-168  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
484 aa  582  1.0000000000000001e-165  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  60.83 
 
 
482 aa  563  1.0000000000000001e-159  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  63.41 
 
 
482 aa  562  1.0000000000000001e-159  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  59.79 
 
 
481 aa  548  1e-154  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  60.42 
 
 
482 aa  532  1e-150  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  59.29 
 
 
482 aa  521  1e-146  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  60.83 
 
 
481 aa  512  1e-144  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
479 aa  323  4e-87  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  40.37 
 
 
476 aa  322  6e-87  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  39.05 
 
 
480 aa  322  6e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  42.18 
 
 
478 aa  318  9e-86  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  38.54 
 
 
473 aa  317  2e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  40 
 
 
479 aa  315  9.999999999999999e-85  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  39.5 
 
 
488 aa  315  1.9999999999999998e-84  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  40.32 
 
 
504 aa  302  8.000000000000001e-81  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  40.95 
 
 
500 aa  296  4e-79  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  38.17 
 
 
505 aa  288  2e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
500 aa  287  2e-76  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  39.56 
 
 
501 aa  285  1.0000000000000001e-75  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
499 aa  284  3.0000000000000004e-75  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
506 aa  283  7.000000000000001e-75  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
506 aa  282  9e-75  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
506 aa  282  9e-75  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
506 aa  282  9e-75  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
505 aa  282  1e-74  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
505 aa  282  1e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
505 aa  280  4e-74  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
502 aa  279  7e-74  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  37.45 
 
 
467 aa  252  1e-65  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  37.82 
 
 
472 aa  251  2e-65  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  34.73 
 
 
467 aa  224  2e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
467 aa  224  2e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.03 
 
 
533 aa  187  5e-46  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40 
 
 
636 aa  186  7e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  35.59 
 
 
541 aa  184  3e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
564 aa  183  6e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
568 aa  183  6e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
533 aa  183  7e-45  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.73 
 
 
533 aa  182  8.000000000000001e-45  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  36.26 
 
 
541 aa  181  2.9999999999999997e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  34.14 
 
 
653 aa  181  4e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  36.48 
 
 
541 aa  179  1e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
626 aa  178  2e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
646 aa  175  9.999999999999999e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  34.29 
 
 
541 aa  174  1.9999999999999998e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
540 aa  174  1.9999999999999998e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  35.37 
 
 
629 aa  174  2.9999999999999996e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  35.08 
 
 
544 aa  174  2.9999999999999996e-42  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.19 
 
 
626 aa  174  3.9999999999999995e-42  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
572 aa  174  3.9999999999999995e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.01 
 
 
626 aa  173  5e-42  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
541 aa  173  6.999999999999999e-42  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
533 aa  173  6.999999999999999e-42  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  31.85 
 
 
634 aa  173  7.999999999999999e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
634 aa  173  7.999999999999999e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.59 
 
 
629 aa  172  1e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  35.37 
 
 
629 aa  172  1e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
425 aa  172  1e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  34.58 
 
 
653 aa  171  2e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  36.28 
 
 
640 aa  171  3e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  36.53 
 
 
541 aa  171  3e-41  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
630 aa  171  3e-41  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
630 aa  171  3e-41  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.75 
 
 
630 aa  170  4e-41  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  34.54 
 
 
542 aa  171  4e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  36.54 
 
 
552 aa  171  4e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009654  Mmwyl1_0410  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
538 aa  170  5e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
637 aa  170  5e-41  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008228  Patl_0520  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
561 aa  169  8e-41  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.859036  n/a   
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
541 aa  169  9e-41  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  36.39 
 
 
561 aa  169  1e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.75 
 
 
630 aa  169  1e-40  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  32.55 
 
 
541 aa  168  2e-40  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
550 aa  168  2e-40  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  33.73 
 
 
663 aa  168  2e-40  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  30.69 
 
 
634 aa  168  2e-40  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I1294  methyl-accepting chemotaxis protein  33.92 
 
 
663 aa  168  2e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.148925  n/a   
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
525 aa  168  2e-40  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  36.8 
 
 
548 aa  168  2e-40  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  32.14 
 
 
541 aa  168  2e-40  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
630 aa  168  2e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  36.91 
 
 
545 aa  167  2.9999999999999998e-40  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
541 aa  167  2.9999999999999998e-40  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.38 
 
 
559 aa  167  2.9999999999999998e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  33.43 
 
 
674 aa  167  2.9999999999999998e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
527 aa  167  2.9999999999999998e-40  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
541 aa  167  2.9999999999999998e-40  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  34.73 
 
 
633 aa  167  2.9999999999999998e-40  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  35.87 
 
 
557 aa  167  2.9999999999999998e-40  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_004578  PSPTO_3291  methyl-accepting chemotaxis protein  35.5 
 
 
542 aa  167  4e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.470345  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  34.34 
 
 
541 aa  167  4e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
554 aa  167  5e-40  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
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