| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1954 |
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| Symbol | |
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| ID | 4604204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2382430 |
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| End bp | 2383944 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781331 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_927829 |
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| Protein GI | 119775089 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0290306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAG TGAAGTTTCG CTGGATAGAT CAATATCTCA TCCACATGAC ACTCAAAACC
AAGTTTGCCA TTTTGGCTAT TGTCCCGGTG CTGATGGTGC TGTCCCTGGC ACTGGTGCTG
AACATCAAAT TTAACGAGAC CTTGCTCGAA ACCCACCTGA CACAAAGCCA AAAGCATACC
AATGAGGTCA ATCAGCTGGT ATCGCAGGCG CTCAATTATA TTCCCGCTGA GCAGCAAGGC
GCATTTTTGC AAAGTCTCTC CGGTAACACT CAGGTAGTGC CGGTCAATAA CTTGGGTAAT
AAGGCCCAGC AATTGGCCCG CAGTGGTGGC GGCAGCGACC AGGCTAACGC TAACGCCCGT
TATCAAACAG TCAGTGCCAT CAGCGACAAG CAGTTGGTCG CAGTGAATAT GCTTGATGCC
AAAGCGGTAG CACTGGAATC CGGTAACGAT ACCTGGTTCG TCATGGGCGC CATCGCGCTG
GTGCTCTTTA TCATCTTTAT CTTCAGCTAC TACATCTCCA CCTTTGTTGG TGGCGCCCTG
TATACCACGG TAATGGCGCT TAAACGTGCC GCCGATGGCG ACCTCACAGG CAGACTTAAC
TTCTTCCAGG TCAAAGATGA GTTCAGTATT CTGGCCATCA GCATCGACTC TTTGGTTGAA
CGTCAGCATA ACCTGGTGAA AAGCATCAAC GACGCCACCC GCCAAATCCG TACTGTGGTG
GAGTCCTTCC GCACCAATGC ACGGGACGGT CAGGCCCTTG CTGCCAGTCA ACGTGCCCAT
CTCGACTCCC TTGCCACCGC CATGGAGCAA ATGACCGCTG CAGTGCGGGA AGTCGCAAGT
AACGCCGAGC ATTCATCCCA GGAAACTCAG GAAGCAAACC AGCAAGTGGC GGCCGGCTCC
AAGGATATTG CAACCACAGT GAGCGCCATA GGTCAGCTTT CCAATGAAAT CGCCAGGGCA
TCAGATGCTG TAACCGTACT CAATGAAAAC GCCAGCCGTA TCGATGAGGT GGTAACCACC
ATTAACGCCA TTTCCGAGCA AACCAATCTG CTGGCGCTTA ACGCCGCCAT CGAAGCAGCA
CGCGCCGGTG AACAGGGACG AGGCTTTGCG GTAGTGGCAG ATGAAGTGCG TACCCTCGCG
GGTCGTACGC AGGCAGCCAC GGTGGAAATC AAATCCATGA TTGAGGCACT GCAATCCGGC
TCCCGTAACC TCACTCAAGT GATGGCGCGG ACCGTTGAGC AAGCCGAAGA AGGCAAAAAG
CATGTGATAA AGACCGGTGA GGATCTCGAC AGCATCGCCC ATCACAGTGC CAAGGTGTTT
GAGATGAGCG TGCTGATTGC CACCTCCGCA GAAGAGCAGT CCGCCGTTGC CAACGAAATT
GCCGGCAATC TGATGGAAAT CCGTAACCAG TCCCACGATG TGGAACAGTC GGCGAACCAG
TCGGTATCGG GTTGTGATGA ACTCCATGCC ACCGCCGAAA AACTCGATAA GCTTTTGGTC
GGATTAAAAC TCTGA
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| Protein sequence | MKEVKFRWID QYLIHMTLKT KFAILAIVPV LMVLSLALVL NIKFNETLLE THLTQSQKHT
NEVNQLVSQA LNYIPAEQQG AFLQSLSGNT QVVPVNNLGN KAQQLARSGG GSDQANANAR
YQTVSAISDK QLVAVNMLDA KAVALESGND TWFVMGAIAL VLFIIFIFSY YISTFVGGAL
YTTVMALKRA ADGDLTGRLN FFQVKDEFSI LAISIDSLVE RQHNLVKSIN DATRQIRTVV
ESFRTNARDG QALAASQRAH LDSLATAMEQ MTAAVREVAS NAEHSSQETQ EANQQVAAGS
KDIATTVSAI GQLSNEIARA SDAVTVLNEN ASRIDEVVTT INAISEQTNL LALNAAIEAA
RAGEQGRGFA VVADEVRTLA GRTQAATVEI KSMIEALQSG SRNLTQVMAR TVEQAEEGKK
HVIKTGEDLD SIAHHSAKVF EMSVLIATSA EEQSAVANEI AGNLMEIRNQ SHDVEQSANQ
SVSGCDELHA TAEKLDKLLV GLKL
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