More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_1442 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  98.76 
 
 
484 aa  954    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  87.81 
 
 
484 aa  852    Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  87.6 
 
 
484 aa  851    Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  82.85 
 
 
484 aa  766    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  87.6 
 
 
484 aa  851    Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  100 
 
 
484 aa  967    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  99.79 
 
 
484 aa  965    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  68.67 
 
 
482 aa  642    Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  87.4 
 
 
484 aa  843    Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  69.92 
 
 
482 aa  630  1e-179  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  66.39 
 
 
481 aa  619  1e-176  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  66.87 
 
 
479 aa  612  9.999999999999999e-175  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  65.91 
 
 
482 aa  588  1e-167  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
482 aa  584  1.0000000000000001e-165  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  66.18 
 
 
481 aa  573  1.0000000000000001e-162  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  43.09 
 
 
480 aa  361  1e-98  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  43.09 
 
 
478 aa  340  2.9999999999999998e-92  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  42.45 
 
 
476 aa  339  7e-92  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  42.15 
 
 
488 aa  336  5e-91  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  39.46 
 
 
473 aa  329  6e-89  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
479 aa  328  2.0000000000000001e-88  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
479 aa  323  3e-87  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  41.75 
 
 
500 aa  318  1e-85  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  41.07 
 
 
504 aa  315  9.999999999999999e-85  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
501 aa  303  4.0000000000000003e-81  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
499 aa  298  1e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
506 aa  298  2e-79  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  40.23 
 
 
505 aa  297  2e-79  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
506 aa  297  3e-79  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  39.52 
 
 
506 aa  297  4e-79  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
506 aa  296  4e-79  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
500 aa  294  2e-78  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
505 aa  291  2e-77  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
505 aa  291  2e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
505 aa  291  3e-77  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
502 aa  289  9e-77  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_004347  SO_3045.2  methyl-accepting chemotaxis protein  90.13 
 
 
152 aa  276  8e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  47.11 
 
 
472 aa  260  3e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  39.19 
 
 
467 aa  258  2e-67  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  33.81 
 
 
467 aa  234  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  34.22 
 
 
467 aa  229  6e-59  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
564 aa  197  4.0000000000000005e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  31.02 
 
 
653 aa  182  1e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  34.05 
 
 
541 aa  182  1e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_009438  Sputcn32_0513  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
542 aa  181  2.9999999999999997e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  36.97 
 
 
713 aa  181  2.9999999999999997e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
626 aa  177  3e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
543 aa  177  5e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
637 aa  177  5e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  30.48 
 
 
653 aa  176  6e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
533 aa  177  6e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  32.44 
 
 
619 aa  175  9.999999999999999e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
646 aa  175  1.9999999999999998e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
568 aa  174  2.9999999999999996e-42  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
572 aa  171  2e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  36.71 
 
 
639 aa  171  3e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
716 aa  170  4e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.18 
 
 
712 aa  170  6e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  36.67 
 
 
564 aa  169  9e-41  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
552 aa  168  2e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.75 
 
 
712 aa  168  2e-40  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
552 aa  168  2e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  35.06 
 
 
538 aa  167  2.9999999999999998e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
636 aa  167  2.9999999999999998e-40  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
640 aa  167  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
541 aa  168  2.9999999999999998e-40  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  38.03 
 
 
433 aa  167  4e-40  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.27 
 
 
541 aa  167  4e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
550 aa  167  5.9999999999999996e-40  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  35.04 
 
 
541 aa  166  5.9999999999999996e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
634 aa  166  6.9999999999999995e-40  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  31.1 
 
 
633 aa  166  8e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
540 aa  166  9e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
425 aa  166  1.0000000000000001e-39  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
640 aa  165  2.0000000000000002e-39  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  35.78 
 
 
568 aa  165  2.0000000000000002e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  35.11 
 
 
545 aa  164  2.0000000000000002e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
541 aa  164  2.0000000000000002e-39  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  35.42 
 
 
539 aa  165  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
552 aa  165  2.0000000000000002e-39  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
527 aa  164  3e-39  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
541 aa  164  3e-39  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
525 aa  164  3e-39  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_008228  Patl_0520  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
561 aa  164  3e-39  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.859036  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
671 aa  164  3e-39  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  35.91 
 
 
640 aa  164  4.0000000000000004e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2822  putative methyl-accepting chemotaxis sensory transducer  32.94 
 
 
673 aa  164  5.0000000000000005e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.428629 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
527 aa  163  7e-39  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  32.6 
 
 
642 aa  163  8.000000000000001e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  34.85 
 
 
540 aa  163  8.000000000000001e-39  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
543 aa  162  9e-39  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
527 aa  162  9e-39  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_010322  PputGB1_3184  methyl-accepting chemotaxis sensory transducer  38.28 
 
 
541 aa  162  1e-38  Pseudomonas putida GB-1  Bacteria  normal  0.799555  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
630 aa  162  1e-38  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009457  VC0395_A0931  methyl-accepting chemotaxis protein  33.89 
 
 
543 aa  162  1e-38  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
543 aa  162  1e-38  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
656 aa  162  1e-38  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  34.94 
 
 
545 aa  161  2e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
540 aa  162  2e-38  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  34.77 
 
 
638 aa  161  2e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
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