| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2398 |
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| Symbol | |
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| ID | 5662791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2923555 |
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| End bp | 2925525 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641237020 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001502253 |
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| Protein GI | 157962219 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.201842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTAA ATTACATGGA TTTAAGTGAT ATTTCGATAA GAGCAAGATT ACTTGCTAGT
AATATTATTA TTTGTAGCAT CCTGATTGTA TTCAATATTG TTGTATACAA ATCAATATCA
ACCATGGAAA CAACTTCACA CTGGGTAGAC CACACTGAAG AGGTAATAGC TCTAACCAAT
GGTCTCGTCA ACTCAATGGT TAATCAAGAA ACAGGAATTA GAGGGTATGC CATAACTGGA
GAAAATGAAT ACCTAGAGCC CTATTTATCA GGCAAGGAAG ACTTTCAAAC ATTTTTTAAT
GCTGCAAAAT TGTTAACCTC AGACAACCCT TCTCAGCAAG TACGCTATGA TGACGTTGCA
AAGCAATCAA AGCTATGGGG TGAGTATGCC GAATCCATTA TTTCGCTGCG TAAAAATATC
CGAAGTGGTG AACAAATTAA TACACAGCTT AAGGAATTAA TTAATTCAGG TATCGGCAAG
CAACAAATGG ATAACATAAG GCTTGAGTTA AATAAGCTTG GATCTTCAAA TTTAAATATC
ACAGTACTAA ATGCCATGGT TAATATGGAG ACAGGTTTAC GCGGCTTTTT ACTCAACCGT
CAAGAAACTT ATCTTGAACC ATATCAAACT GGAAAAAACG TGATAGACCA ACAAAACTCC
AATATCAAGG AAACTAGACT CGCAGAGTCT ATTGATTCAT GGATTAATGA CTACGCCCAA
CAAGCGATTA CATTAACTCG TCAATCAACT CAGTTCAAAT CAATGTCAGA TCTCTATGCT
GTGCTAGACA AGAAGCAGGG GAAAGTATAC ATGGATGAAT TGCGTTCGAA AGTAACTGGC
ATCATTGATG TTGAGCTTAG TTTGATGGAA CAAAGAAAAG CCGAATCAGC AAGTGCGGCA
ACTATGGCAA CAAGGGTCAT CATATGGGGT TGCATTATAG TCATTCTACT TGTCTTTGTA
TTTTCTCATA TCACATCAGT AAGTATCATT AACCCCATCC AACAAGCCGT AGCCTATGCA
AAACAATTAG CCGCAGGTAA TTTAAATATT AATGTTGGAC AACAAGGTAA GAGTGAATCA
GGCGTACTGC TATTAGCAAT CCAAACTGTT TCAAATAATC TGAAGGACAT GATCGGACAC
ATTGCACAAA CCAGTAGTAA ACTCAATGAC GCTTCAACGT ACCTAAACTC AGTGCTTGAT
AAGACAGGCT CTGGCGCAAA AGATCAGCTA GATAAAACTG AGCAAATAAC AGATGCCATG
CAACAGTTAT CGCTTGCCGT ACAGGAGGTC TCGCAAAATA CCGTAAATGC TTCGCATGTC
GCGACGAAAG CTGTTGATGA AGCCGAGGCT GGCTATGGAG TTATCCAAAA TACCATCGGA
CATATTGGTG ATTTAAATGA TGAGATTAAA CGAACGTCCT TAAAAATTAC TAGTCTTGCA
GAAGAGACAA ACAATATCGG TAAGATTCTC GACGTAATTG GTGGCGTTGC TGAGCAAACT
AATTTATTGG CACTAAACGC TGCGATAGAA GCTGCTCGGG CGGGTGAACA AGGGCGAGGA
TTTGCAGTTG TCGCTGACGA AGTGCGTGTG CTAGCTCAAA GAACACAAGA ATCGACTACT
GAAATACATT CTTTAATTGA AAGTATTCAA AGTGGTACAA AAGATGTTGT TAATAGTATG
CAGCAAAGTA CTGGCTTATT AACAGCAAGC ATCGACTCAG CAAGTCATTC AGGTGGGACA
TTTTCAGAAA TTACGCGATC CATCACCAAA ATTAATGACA TGAATACGCA AAGCGCTAGC
GCAACAGAGC AGCAAAGCGT TGCAACTGAA CAAGTTAATA CTAGTATGTT GGCAGTCAAT
AGCATCTCTC AAGAAAATTA CACTTTAATG ATGGACTCAG TTAGGTCGTG TGAAGACCTA
ACAAACCTGT CAAATTCATT AAATGCTACT GTTAAGCAAT TCAAGATGTA A
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| Protein sequence | MTVNYMDLSD ISIRARLLAS NIIICSILIV FNIVVYKSIS TMETTSHWVD HTEEVIALTN
GLVNSMVNQE TGIRGYAITG ENEYLEPYLS GKEDFQTFFN AAKLLTSDNP SQQVRYDDVA
KQSKLWGEYA ESIISLRKNI RSGEQINTQL KELINSGIGK QQMDNIRLEL NKLGSSNLNI
TVLNAMVNME TGLRGFLLNR QETYLEPYQT GKNVIDQQNS NIKETRLAES IDSWINDYAQ
QAITLTRQST QFKSMSDLYA VLDKKQGKVY MDELRSKVTG IIDVELSLME QRKAESASAA
TMATRVIIWG CIIVILLVFV FSHITSVSII NPIQQAVAYA KQLAAGNLNI NVGQQGKSES
GVLLLAIQTV SNNLKDMIGH IAQTSSKLND ASTYLNSVLD KTGSGAKDQL DKTEQITDAM
QQLSLAVQEV SQNTVNASHV ATKAVDEAEA GYGVIQNTIG HIGDLNDEIK RTSLKITSLA
EETNNIGKIL DVIGGVAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRV LAQRTQESTT
EIHSLIESIQ SGTKDVVNSM QQSTGLLTAS IDSASHSGGT FSEITRSITK INDMNTQSAS
ATEQQSVATE QVNTSMLAVN SISQENYTLM MDSVRSCEDL TNLSNSLNAT VKQFKM
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