| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3852 |
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| Symbol | |
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| ID | 4280743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4601031 |
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| End bp | 4602434 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136673 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_752516 |
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| Protein GI | 114565002 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAG TTGCCTTTCG TTGGATAGAT AAGTATTTAA TTAGCGTAAA GTTACATGAA
AATTTTCTTG TTCTTTTTTT TACTGCTGTG CTTGCCGTTG TCGTCATGGG CATTTGTTTT
GCTGACGCGG CGTCTTCACA AAGAACAATA GAAGCACAAA AACAAGTTGA TGTGATTGCC
CAATTGGCAT CGGCGACTCA GATATCAGCA TCTGATCTGG CGCCCTTACT GCAAAATACA
GCGATTAATA TTGGCCTTAA TACTGATATT TCGGCTCAGG TTTCAGGGCA AGACTATTCA
TTAAGTTATG TTGATGACAC TAATTTTCTG ACTGGGTTAG GTTTATGGCA CATCACTGCC
ATTAGCTTGA GTTTATTGTT GATGTTTGTT TGCTCTTATT ATGTAAATAC CTTCATCGGT
GGCAGTCTAT TCGATATTTA TGGAGCATTG AAAAGGTTGG CCGAAGGGGA TCTTGCATCT
CGTATTGGTT ATGCGCCTGC GCGTAATGAA TTTAATTTGA TTGCAAGAAC CGTTGATAGG
GTCACTGAAC GTGAACATCT GTTGGTGAAA ACCACTCAAG AAGCAGTTGC TTTGATCCAA
CAAATTAGTG CTCAGTTACG TGTGCGTAGT GATGAAAATA CTCAGTTGGC CAGCGTGCAG
CAAGACCGCA TTGATTCGTT AGCCAGTGCA ACGGAAGAAA TGGCAGTGTC GATTCGAGAA
GTCGCTAGCC ATGCTCAAGA ATCATCTACG CAAATATCGC GTGCAACGGA GAAAACCACA
CAAGGCCAAG CTCAGATCAA AAAAACCTTG GTTGAGATTA ATCAATTAGC AGGGGAAGTA
CGTGGTACCT CAGTTGCTGT TGCAGAACTT GATTCTAGCG CGACTGAAAT TGGTGAGGTT
ATTGCAACGA TTAATGCCAT TTCTGACCAA ACCAACTTGC TAGCCCTTAA TGCTGCTATT
GAAGCGGCAA GAGCAGGCGA ACAGGGACGT GGATTCTCAG TGGTTGCAGA TGAAGTAAGA
ACCTTAGCGG GAAGAACTCA AGCTGCGACC GTTGAAATTC AAAAAATTAT TGAAACGCTA
CAAACCAATA GCCGTGGTGT GATGAACGTG ATGGCGAAAA CGGTAAAAGA AGCTGAATCA
AGCGAACAGT TAATGACAAG TGCAAGTCAA AATATTAGTG AAATCGCAGA GCAAAACCAG
CATATTTCAG ATAGAAGTTT GGAAATTGCA GCCGCTGCCG AGGAACAAGG CGCTGTGGCT
GATAATATTG CCAGTGATGT TGATTCTGTC AGAAGTAGTT CTATTCAAGT GATGGAGTTA
GTGAATATGA CAGCAAAAGA AATCGAGAGT TTGAGCCGTC AGGCGGATGT GCTGGAAGGT
TTGATGAAGG ATTTGATTAT TTAA
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| Protein sequence | MKQVAFRWID KYLISVKLHE NFLVLFFTAV LAVVVMGICF ADAASSQRTI EAQKQVDVIA
QLASATQISA SDLAPLLQNT AINIGLNTDI SAQVSGQDYS LSYVDDTNFL TGLGLWHITA
ISLSLLLMFV CSYYVNTFIG GSLFDIYGAL KRLAEGDLAS RIGYAPARNE FNLIARTVDR
VTEREHLLVK TTQEAVALIQ QISAQLRVRS DENTQLASVQ QDRIDSLASA TEEMAVSIRE
VASHAQESST QISRATEKTT QGQAQIKKTL VEINQLAGEV RGTSVAVAEL DSSATEIGEV
IATINAISDQ TNLLALNAAI EAARAGEQGR GFSVVADEVR TLAGRTQAAT VEIQKIIETL
QTNSRGVMNV MAKTVKEAES SEQLMTSASQ NISEIAEQNQ HISDRSLEIA AAAEEQGAVA
DNIASDVDSV RSSSIQVMEL VNMTAKEIES LSRQADVLEG LMKDLII
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