| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3066 |
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| Symbol | |
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| ID | 4019592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3682626 |
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| End bp | 3684092 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957118 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_564067 |
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| Protein GI | 91794416 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.301784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAG TAGATTTCCG AACTATTGAT AGATTGTTCA TTAAGATGTC AATCAATGAT
AAGTTTTGGT CGATATTCAG TCTATTTATG ATCGTCTTAC TGACACTGTC CCTCGGCCGC
TATCAGCACT CTATCAACCA AATAGAGCAG CAATCTGTTA TTGCATTAGA ATCTCAACTC
TCGGGTATGG TGCAAGCATT AGAGACCACA GGTCAAACGG ATAAGTTTGC TCAGCTAGGT
ATTAACTCTA CCTCGGCAAC CAGCTCCAGC AGACAAAGAA ACACCATTAC GGCCGTGGTA
AAAACCAGTA GCCAAGAATA CGTGTCTCAA ACTCAAGGGG CACCTAATAT CGAAGCCGAT
ACCAAGCAAG CGGCGTTTTA TTCCCTGTTA TTGTCTTTCC TTTGGGTATT GCCTTTCTCT
TTAGTGCTCT ATTGGATCGC CACTTTTCTC GGCGGTGCCT TGTGGGTGCT ATGGGATACT
ACAGAGAAAA TCGCCAAGGG TGACTTGAGC TCTCGTTTAG GTTTCCATCC TGGGCGTGAT
GAATTTGGCA CCATAGGCTG TGCATTAGAC AAGGCCATGG ACACTCTAAC TGAATTAGTT
ATTACCGTTA AAGGCAGCGC CAAGACCTTA CATACCACAT CGACGTCCTT TGCCAATGAG
ACTCGCCAGA GCGAAGAGCA AATCGATTCC CAGTATGAGT CATTAGACTC AGTGGCGACG
GCAATGGAAG AAATGACCGC CTCTTCACTG GTTGTGTCTG GTATTTCGCA GAAAGCATCG
AAGCAAGTAG AACAAGATTC TGAATATATA AAGCAAAGTT ATGGCCGGGT TCAAAAAGCC
ATAGGTGAAA TTCAGCAGTT GTCTAACTAT ATTGAACAGA CTTCAGATTC TGTGACCACA
TTGCAACTGA ACGCCACCAA GATTAATGAC GTGATAACCA CCATTAATTC AATCTCAGAG
CAAACCAACT TATTGGCACT CAACGCCGCG ATTGAAGCGG CCCGTGCGGG TGAAATGGGC
CGCGGCTTTG CGGTCGTTGC CGATGAAGTG AGAACCTTGG CCAGCCGCAC TCAGGCAGCT
ACGGTTGAAA TTCAGGCCAT GATTGCCAAC TTGCAATCTG AAACCAGTAA TATCTCTAGC
ATTACCCAAA ATACGGTTAA GCAAGCTCAG TCGAGCCGGG AACTTATCTC AAATATAGGC
ACAGATGTAA ATTCGATTAC TCAATCGTCC CAGTCTATTA TCGATATGAG CTACCAAATT
GCCGCTTCAG CCGAAGAGCA GAGCACGGTT GCCAATGAAA TCTCATCTGA ACTAAGCGAA
ATTCGCACTA AATCAAACAC CATTCGCGAC TTAGCGAGAC AATCGTCTCA CGGGGTGGTC
GAATTATCAC AAGCGTCTGA TAAATTAGGA AAAATACTTT CTAACTATCA CACAGCTAAG
ACAGATTTCA AACGCAGTAT TGATTAA
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| Protein sequence | MKEVDFRTID RLFIKMSIND KFWSIFSLFM IVLLTLSLGR YQHSINQIEQ QSVIALESQL
SGMVQALETT GQTDKFAQLG INSTSATSSS RQRNTITAVV KTSSQEYVSQ TQGAPNIEAD
TKQAAFYSLL LSFLWVLPFS LVLYWIATFL GGALWVLWDT TEKIAKGDLS SRLGFHPGRD
EFGTIGCALD KAMDTLTELV ITVKGSAKTL HTTSTSFANE TRQSEEQIDS QYESLDSVAT
AMEEMTASSL VVSGISQKAS KQVEQDSEYI KQSYGRVQKA IGEIQQLSNY IEQTSDSVTT
LQLNATKIND VITTINSISE QTNLLALNAA IEAARAGEMG RGFAVVADEV RTLASRTQAA
TVEIQAMIAN LQSETSNISS ITQNTVKQAQ SSRELISNIG TDVNSITQSS QSIIDMSYQI
AASAEEQSTV ANEISSELSE IRTKSNTIRD LARQSSHGVV ELSQASDKLG KILSNYHTAK
TDFKRSID
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