| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2263 |
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| Symbol | |
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| ID | 4922618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2641915 |
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| End bp | 2643363 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163848 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001094388 |
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| Protein GI | 127513191 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00569391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.100749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA TCCAGTTTAG AAAGATAGAT GCCTTGCTGA TCAAACTCAG TCTTAACGGT
AAATTTTGGG TGGTCTGCTC TATGGTGACG GCCATTACCC TGACCATCGC CTTGTTGAAC
TTAAATGCCG CCAACAATCA ATTGCACGCC GGCTCGGCGG CCCGGGTACA GGCGAGCGTC
GATGCCTATG CCAAGGTGGC GAGCCAGATG GGCTTAAGTG GTGAGGCGCT GGCGCGTTTT
GCCCAGGACA ACAGCCTGAG GCTGGCATCT CGTGATGAGC AGTCGCGCCG CGGTGATAGC
GTGACCGCTA GCGCGCCGGT CGCCGGTCAA TATCTGCAGC TGAGCCAGGA CGTTGCCGCC
TGGGAAGCCG AAGGCAAGAG CGATGCCTGG TGGATGCTGT GGGTCGCCCT TATCGCCCTC
TATCCGCTGT ATCAGCTGAG TTACTGGATC TCCACCTCCC TGGGCGGCGG TCTGTGGGAC
ATGTATATCG CTATCAAGCG GCTGGCCGAT GGCGATCTCT CCTTCAGACT CAATTTCTTC
GGTAAGGATG ACTTCAGTCT TATCGCCCGG GAGATCGACC GAAACGCGGA CAACATGAGC
GAGATGGTCA AAGCCATAGG CAACAATGCC AGGACGCTCG CTAATGCCTC CGATGAGTTT
AATCTGCAGG CGAAACAGAA CGATGAGCTG GCGCAGTTCC AGCATCAGTT TCTCGATACC
GTCGCCGTGG CGATGGATCA GATGACCGCC GCCATCGAAG AGGTGTCCCA TAACGCGGCC
AACACCTCAG ATCATACCAA GCATAATGCG ACGGCCGCGG CCGACAGCAA GCAGCGTATC
GCCGAGGCGG TGCGCCGTAT CGGCCAGTTG ACTGGCCAGA TAGATGCGGC ATCCAGCGCG
GTGGATCAGC TGTCGGGCAA CGCCACAGAG ATTGGTGCCG TGGTGACCAC CATCAACGGT
ATTTCCGAGC AGACCAATCT GCTGGCGCTG AATGCGGCCA TCGAGGCGGC GCGTGCCGGT
GAGCAGGGCC GTGGCTTTGC CGTGGTGGCC GACGAGGTTC GAACCCTGGC GGGACGCACC
CAGCAGGCGA CGGTGGAGAT ACAGTCGATG ATCGAGGGGC TGCAGTCGGG CTCGGGTCAG
CTGGCGGATA TTACCCATGA GATTGTCGAG CAGGCCGAGC TTGGCCGTGC GGCCATAGAG
TCAGTGGGCA GCGATGTGGA TACCATGGCC GATTCTATCG ATCAGGTGTT CGACATGAGC
TCGCAGATCG CCGCTTCGGC GGAGGAGCAG AGCGTGTCGG CGCGGGATAT CGCCTCGCAG
CTCAATGAGA TCCGTGACCA GTCGCAGACC ATCAAGGAGA CCGCCGAGCG TTCTGTGGTC
TTGGCGAGCG AGCTGCAGCA ATCTTCCACT GAGCTGGATG GCATTCTGTC GCAATACCGC
TTGCAGTAG
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| Protein sequence | MKAIQFRKID ALLIKLSLNG KFWVVCSMVT AITLTIALLN LNAANNQLHA GSAARVQASV
DAYAKVASQM GLSGEALARF AQDNSLRLAS RDEQSRRGDS VTASAPVAGQ YLQLSQDVAA
WEAEGKSDAW WMLWVALIAL YPLYQLSYWI STSLGGGLWD MYIAIKRLAD GDLSFRLNFF
GKDDFSLIAR EIDRNADNMS EMVKAIGNNA RTLANASDEF NLQAKQNDEL AQFQHQFLDT
VAVAMDQMTA AIEEVSHNAA NTSDHTKHNA TAAADSKQRI AEAVRRIGQL TGQIDAASSA
VDQLSGNATE IGAVVTTING ISEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRTLAGRT
QQATVEIQSM IEGLQSGSGQ LADITHEIVE QAELGRAAIE SVGSDVDTMA DSIDQVFDMS
SQIAASAEEQ SVSARDIASQ LNEIRDQSQT IKETAERSVV LASELQQSST ELDGILSQYR
LQ
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