More than 300 homologs were found in PanDaTox collection
for query gene Shew_2263 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  100 
 
 
482 aa  964    Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
NC_010506  Swoo_2947  methyl-accepting chemotaxis sensory transducer  71.1 
 
 
482 aa  646    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  69.29 
 
 
484 aa  640    Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  72.77 
 
 
482 aa  681    Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  69.92 
 
 
484 aa  642    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  69.09 
 
 
484 aa  642    Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  69.5 
 
 
484 aa  642    Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  69.09 
 
 
484 aa  639    Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  69.92 
 
 
484 aa  640    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  69.92 
 
 
484 aa  640    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  69.71 
 
 
484 aa  606  9.999999999999999e-173  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  64.45 
 
 
481 aa  596  1e-169  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_009901  Spea_1637  methyl-accepting chemotaxis sensory transducer  64.66 
 
 
482 aa  587  1e-166  Shewanella pealeana ATCC 700345  Bacteria  normal  0.301948  n/a   
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  63.41 
 
 
479 aa  566  1e-160  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  63.62 
 
 
481 aa  548  1e-155  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  43.27 
 
 
478 aa  340  2.9999999999999998e-92  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  42.39 
 
 
479 aa  336  7e-91  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_009784  VIBHAR_05936  hypothetical protein  40.87 
 
 
480 aa  333  4e-90  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  42.3 
 
 
476 aa  332  6e-90  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  41.08 
 
 
488 aa  333  6e-90  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  39.75 
 
 
473 aa  323  5e-87  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  42.29 
 
 
504 aa  323  6e-87  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
479 aa  321  1.9999999999999998e-86  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  43.52 
 
 
500 aa  295  1e-78  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  41.32 
 
 
500 aa  293  5e-78  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
499 aa  292  1e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
505 aa  291  2e-77  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  40.4 
 
 
505 aa  290  4e-77  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
505 aa  288  1e-76  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
505 aa  288  1e-76  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
501 aa  286  4e-76  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  40.08 
 
 
506 aa  286  5.999999999999999e-76  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
506 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
506 aa  283  3.0000000000000004e-75  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  39.96 
 
 
506 aa  283  4.0000000000000003e-75  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
502 aa  278  2e-73  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  38.63 
 
 
472 aa  254  2.0000000000000002e-66  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  37.97 
 
 
467 aa  250  4e-65  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
467 aa  246  6e-64  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  35.68 
 
 
467 aa  236  5.0000000000000005e-61  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
568 aa  202  8e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  36.24 
 
 
541 aa  202  9.999999999999999e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  32.71 
 
 
653 aa  194  3e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  32.88 
 
 
637 aa  194  3e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  33.78 
 
 
653 aa  191  2e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
541 aa  191  2e-47  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  34.57 
 
 
541 aa  191  2.9999999999999997e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
541 aa  190  4e-47  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  35.71 
 
 
642 aa  187  4e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  34.76 
 
 
619 aa  186  6e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
541 aa  186  7e-46  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  37.5 
 
 
539 aa  186  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  36.1 
 
 
541 aa  184  2.0000000000000003e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  36.54 
 
 
639 aa  184  2.0000000000000003e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  38.89 
 
 
418 aa  184  2.0000000000000003e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  37.25 
 
 
418 aa  184  3e-45  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
646 aa  183  6e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  35.22 
 
 
541 aa  183  6e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
564 aa  183  6e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
638 aa  183  7e-45  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
543 aa  182  9.000000000000001e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
547 aa  182  2e-44  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
527 aa  180  4e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  36.89 
 
 
533 aa  180  4e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  34.92 
 
 
642 aa  180  4e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.2 
 
 
533 aa  181  4e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  37.15 
 
 
541 aa  180  4.999999999999999e-44  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
640 aa  180  5.999999999999999e-44  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_010501  PputW619_2593  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
540 aa  180  5.999999999999999e-44  Pseudomonas putida W619  Bacteria  normal  normal  0.591477 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  33.93 
 
 
541 aa  180  7e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  33.63 
 
 
681 aa  179  9e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
638 aa  179  1e-43  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  35.8 
 
 
433 aa  179  1e-43  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  33.96 
 
 
633 aa  178  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  35.06 
 
 
676 aa  178  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
638 aa  178  2e-43  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  33.41 
 
 
637 aa  178  2e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.9 
 
 
626 aa  178  2e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  35.42 
 
 
629 aa  177  3e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3348  histidine kinase, HAMP region: chemotaxis sensory transducer  33.71 
 
 
542 aa  177  3e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.946905  normal  0.024921 
 
 
-
 
NC_011663  Sbal223_0226  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
527 aa  177  3e-43  Shewanella baltica OS223  Bacteria  normal  normal  0.16836 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
541 aa  177  4e-43  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009997  Sbal195_4233  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
525 aa  177  4e-43  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000524679 
 
 
-
 
NC_008322  Shewmr7_3799  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
527 aa  177  4e-43  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
638 aa  177  5e-43  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  35.12 
 
 
640 aa  176  7e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
541 aa  176  8e-43  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  34.1 
 
 
541 aa  176  8e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
527 aa  176  8e-43  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  33.73 
 
 
540 aa  176  9e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4113  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
527 aa  175  9.999999999999999e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
541 aa  175  9.999999999999999e-43  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
636 aa  175  9.999999999999999e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
573 aa  175  1.9999999999999998e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  33.99 
 
 
542 aa  174  3.9999999999999995e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0410  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
538 aa  174  3.9999999999999995e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
634 aa  174  3.9999999999999995e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  34.25 
 
 
544 aa  174  3.9999999999999995e-42  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
541 aa  173  5e-42  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  33.52 
 
 
541 aa  173  5.999999999999999e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
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