| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0643 |
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| Symbol | |
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| ID | 4602896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 798239 |
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| End bp | 799675 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779978 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_926521 |
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| Protein GI | 119773781 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000131612 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGG TCGATTTTCG AACTATCGAT AAAATTTTCA TCCGCATGTC CATTAACGAC
AAGATGTGGG TTGTGTTTTT GCTGTTTGTA CTGGCACTGG GAACCACTGC CGGGTTGCGC
TATTCCCAGA GTGTCGATGC CATAGAGGCA AGCTCGCTCA AGGCTGCAGA AGCCCGATTG
GCAGGTATGC TGGACACGCT GAATGCCACC GGCCAGTTTG AGAAAGCCGC CAGTCTTGGA
TTAACCACGG GGCGTGGCAA AAATCGCCAT GATGGGGATT CAGTCACCGT CAGTGCCATT
GCGGCCAATG GCCAGAGCTA CTCGCTGGAA CAGGATGTTC GCAGTCAGGA GAGCAAGGCA
CGCTCTGCGG CCAGTGCTGG CCTGCTTTGG ACTGGCTTGT GGCTGTTACC GTTTGGCCTG
TTTTTATACT GGGTGGCCAC CTTTATCGGC GGTGCCCTGT GGGTGCTGTA CACCACCACA
GAGAAAATTG GCTCAGGGGA TTTGACCTCT CGTTTAGGCT TCCACCCGGG GCGTGATGAG
TTCGGTACCA TTGGCTGTGC ACTGGATAAA GCCATGGACA CCCTCACTGA GCTCGTTAAG
GTGGTGAAAG CCAACGCCGA CACCCTGAGT GATACTTCCG AGTCCTTTGA GCGGGAAATG
AAGCAGAGCC TGCAGCAGAT TAATCGCCAG TATGTGTCGC TGGACTCGGT TGCCACAGCC
ATGGAAGAAA TGACGGCTTC AGCGCAGGAG GTGTCCAATA TCTCCCGTCA GGCCACCGAA
AAAACCGAGC AGGATGCCAC CCAGGTGGAA AGCAGTTTCC AGCGGGTGCA AAAGGCCATT
TCTGACATTG AGCAGCTGTC GGGGCTGATT GAACAGGCCT CAAGTTCAGT GGCGACGCTC
AATGTAAACA CGACACAAAT CAACGAAGTG ATCACCACCA TTAATGCGAT TTCTGAGCAA
ACCAACCTGT TGGCGCTCAA CGCCGCGATT GAGGCGGCCC GTGCGGGCGA ACAGGGCAGG
GGCTTTGCCG TGGTGGCAGA CGAGGTGCGC ACCCTGGCAA GCCGCACCCA GGCGGCAACC
GTTGAAATTC AGGCCATGAT TGAAAAACTG CAGGGCGAGA GCCGTAACAT CGCCAATATT
ACCGAAAAGA CGGTCAGTCA GGCCCAGTCA AGCAGTGGGG TTATTGCCAA CATAGGCGCG
GATGTGAGGG GTATTGCCGA CTCCTCCCGT GCCATTACCG ACATGAGCAT CCAGATATCC
ACCTCCGCCG AAGAGCAGAG CAGCGTGGCC AACAGTATTG CCGCAGAGCT CAGTGACATC
CGTAACCAGT CCAACACCAT ACGTACGGTG GCGGAGCAGT CATCGGAAGG GGTCGCCAGA
CTCGCTGAGG CCTCTCGCTC CCTGGGTAAG GTATTGGCCC GTTATCGCAC CAATTGA
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| Protein sequence | MKQVDFRTID KIFIRMSIND KMWVVFLLFV LALGTTAGLR YSQSVDAIEA SSLKAAEARL
AGMLDTLNAT GQFEKAASLG LTTGRGKNRH DGDSVTVSAI AANGQSYSLE QDVRSQESKA
RSAASAGLLW TGLWLLPFGL FLYWVATFIG GALWVLYTTT EKIGSGDLTS RLGFHPGRDE
FGTIGCALDK AMDTLTELVK VVKANADTLS DTSESFEREM KQSLQQINRQ YVSLDSVATA
MEEMTASAQE VSNISRQATE KTEQDATQVE SSFQRVQKAI SDIEQLSGLI EQASSSVATL
NVNTTQINEV ITTINAISEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR TLASRTQAAT
VEIQAMIEKL QGESRNIANI TEKTVSQAQS SSGVIANIGA DVRGIADSSR AITDMSIQIS
TSAEEQSSVA NSIAAELSDI RNQSNTIRTV AEQSSEGVAR LAEASRSLGK VLARYRTN
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