| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1499 |
|---|
| Symbol | |
|---|
| ID | 4478136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1746851 |
|---|
| End bp | 1748305 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639726069 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_869139 |
|---|
| Protein GI | 117919947 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TCCAGTTTCG CACCATTGAT GCCATATTGA TCAAATTCAG TCTCAACGGA
AAGTTTTGGG TTGTCTGTTC TATGGTGGCG CTGATCACCG CCGCCGTTGC ACTCGTCAAT
TACCAACATG CTCACCGTAA CCTCGAAGCC GCCTCTTTGG CTCGGGTACA GGCGACCGTC
GATGCCTTTG CCCAAGTCGC GAATGCGCAA AAATTGCAGG GTGATGCCCT GTCACAGTTT
GCCCGTGACA ATGGTTTAAG TGTTGTCACT CGCCAAACAG AGGCGCTGCG CCAAAGGGAT
AATGTGACTG CCAGTGCCAG CGTGGGATCA GGCGGCGCAC TCGAGCTGTC GCAAAATGTT
GCTCAATGGG AAAGCGAGGG GCGTAGCGAT GCCAACTTAA TGTTTTGGCT CGCGTTAATC
GGTTTATTGC CCTTATTCCA ACTCAGCTAC TGGATTTCAA CCTCCCTCGG CGGTGGTCTG
TGGGATATGT ACATGGCCAT CAAACGCTTA GCCGATGGTG ACCTAAGTTT TAGATTAAAC
TTTTTCGGCA CCGATGACTT CAGCTTAATC GCTCGCGAAA TCGACCGCTG CGCCGATAAC
ATGAGCGAAA TGGTGAGTGC TATCCGCAGC AATGCGCAGA CGCTCTCCCT CGCCGCTGAT
GAGTTTAATC AACAGGCCAA AAGCAGTGGC GAGTTAATTG GTGCCCAGCA TCAATTTTTA
GACTCAGTTG CCGTGGCCAT GGCGCAGATG ACTTCGGCGA TTGAAGAAGT GTCGGTCAAT
GCCAGCAACA CCTCGCTCCA GACCAAAGAT AACGCCAGCC AAATGAGTGC CAGCCAAGGA
CGTATTAGCC ACACGGTGGA CAGTATCGGG CAGCTCTCAA CCAAGATTGG CGCAGCATTT
TCGTCGGTGG AACAGTTATC TAAGGATGCG GCGGGTATCG ATGCCGTAGT GACGACCATC
AACAGTATTT CCGAGCAGAC CAATTTGCTG GCGCTGAATG CGGCGATTGA AGCTGCCCGT
GCGGGTGAGC AAGGCCGTGG TTTTGCGGTG GTTGCCGATG AAGTTCGTAC CTTAGCGGGA
CGGACTCAAC AAGCGACAGT TGAGATCCAA GCGATGATCG AAGGATTGCA ATCGGGCACT
CGTCAGCTCT CCAATATCAC CACTGAGATT GTGGACCGCG CCGATGAAGG CCGCAGCGCC
ATTATTGCCG TGGGCGACGA TGTCGAAGGG ATGGCACAAT CGGTTAATGC TGTATTCGAT
ATGAGTAGCC AGATTGCTGC ATCGGCGGAA GAGCAGAGCG TTGCCGCCCG TGATATTGCT
GGCCAACTCA ATGAGATCCG TCATCAATCC GATACCATTA AACAAACGGC GCAGCGCAGT
GTCACCCTAG CGCATGATTT GCAACATGCC TCGGTTGAAC TCGAAGGGAT CCTTAAACAG
TACCGCACTA GCTAA
|
|---|
| Protein sequence | MKQIQFRTID AILIKFSLNG KFWVVCSMVA LITAAVALVN YQHAHRNLEA ASLARVQATV
DAFAQVANAQ KLQGDALSQF ARDNGLSVVT RQTEALRQRD NVTASASVGS GGALELSQNV
AQWESEGRSD ANLMFWLALI GLLPLFQLSY WISTSLGGGL WDMYMAIKRL ADGDLSFRLN
FFGTDDFSLI AREIDRCADN MSEMVSAIRS NAQTLSLAAD EFNQQAKSSG ELIGAQHQFL
DSVAVAMAQM TSAIEEVSVN ASNTSLQTKD NASQMSASQG RISHTVDSIG QLSTKIGAAF
SSVEQLSKDA AGIDAVVTTI NSISEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRTLAG
RTQQATVEIQ AMIEGLQSGT RQLSNITTEI VDRADEGRSA IIAVGDDVEG MAQSVNAVFD
MSSQIAASAE EQSVAARDIA GQLNEIRHQS DTIKQTAQRS VTLAHDLQHA SVELEGILKQ
YRTS
|
|---|
| |