More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A2016 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  80.14 
 
 
418 aa  647    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  100 
 
 
433 aa  874    Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  79.43 
 
 
418 aa  627  1e-178  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  66.31 
 
 
533 aa  480  1e-134  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  40.28 
 
 
536 aa  222  9.999999999999999e-57  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  40.66 
 
 
489 aa  204  3e-51  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  35.7 
 
 
493 aa  202  9.999999999999999e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.37 
 
 
640 aa  201  3e-50  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
637 aa  199  1.0000000000000001e-49  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  40.2 
 
 
529 aa  197  3e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  36.49 
 
 
559 aa  197  4.0000000000000005e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
541 aa  197  4.0000000000000005e-49  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
552 aa  197  4.0000000000000005e-49  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
552 aa  197  4.0000000000000005e-49  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  37.35 
 
 
541 aa  196  1e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40 
 
 
637 aa  195  1e-48  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  42.34 
 
 
647 aa  194  2e-48  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  38.58 
 
 
619 aa  194  3e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  39.22 
 
 
647 aa  194  3e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
645 aa  193  4e-48  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
492 aa  193  5e-48  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
645 aa  193  6e-48  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
645 aa  193  6e-48  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.14 
 
 
533 aa  193  7e-48  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  37.21 
 
 
664 aa  192  8e-48  Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  39.06 
 
 
634 aa  192  1e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  36.39 
 
 
492 aa  192  1e-47  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
636 aa  192  1e-47  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  35.31 
 
 
666 aa  192  1e-47  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
492 aa  191  2e-47  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
664 aa  191  2e-47  Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
543 aa  191  2e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  37.43 
 
 
492 aa  191  2e-47  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  37.13 
 
 
623 aa  191  2e-47  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
634 aa  191  2e-47  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
664 aa  191  2e-47  Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  36.17 
 
 
646 aa  191  2e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  34.26 
 
 
628 aa  191  2.9999999999999997e-47  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.94 
 
 
633 aa  190  4e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
645 aa  190  4e-47  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
664 aa  190  4e-47  Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
664 aa  190  4e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
620 aa  190  5e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
626 aa  189  7e-47  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
662 aa  189  8e-47  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  36.36 
 
 
541 aa  189  1e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.13 
 
 
629 aa  188  1e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
664 aa  189  1e-46  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  39.81 
 
 
541 aa  189  1e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
664 aa  189  1e-46  Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
541 aa  188  1e-46  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
620 aa  189  1e-46  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
620 aa  189  1e-46  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
622 aa  187  2e-46  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  39.03 
 
 
643 aa  188  2e-46  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009456  VC0395_0713  methyl-accepting chemotaxis protein  35.1 
 
 
473 aa  188  2e-46  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  35.84 
 
 
640 aa  187  3e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
547 aa  187  3e-46  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  34.34 
 
 
629 aa  187  3e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
674 aa  187  3e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.1 
 
 
712 aa  187  3e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
716 aa  187  4e-46  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
620 aa  187  4e-46  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  36.81 
 
 
713 aa  187  4e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
636 aa  187  4e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.28 
 
 
521 aa  186  5e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.19 
 
 
523 aa  187  5e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
638 aa  186  5e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  34.34 
 
 
629 aa  186  5e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  35.96 
 
 
623 aa  186  6e-46  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
639 aa  186  6e-46  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  186  7e-46  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.97 
 
 
638 aa  186  8e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  34.25 
 
 
632 aa  185  1.0000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  34.71 
 
 
628 aa  185  1.0000000000000001e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.81 
 
 
712 aa  185  1.0000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
638 aa  185  1.0000000000000001e-45  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  35.62 
 
 
653 aa  186  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  38.94 
 
 
679 aa  185  1.0000000000000001e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  33.72 
 
 
645 aa  186  1.0000000000000001e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
425 aa  186  1.0000000000000001e-45  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009092  Shew_2217  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
500 aa  185  1.0000000000000001e-45  Shewanella loihica PV-4  Bacteria  normal  0.802205  normal  0.183546 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  35.81 
 
 
540 aa  184  2.0000000000000003e-45  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  33.97 
 
 
632 aa  185  2.0000000000000003e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
638 aa  184  3e-45  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  37.34 
 
 
550 aa  184  3e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
552 aa  184  3e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
572 aa  184  3e-45  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  39.1 
 
 
560 aa  184  3e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  36.42 
 
 
621 aa  184  3e-45  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  35.55 
 
 
542 aa  183  6e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
638 aa  182  7e-45  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
555 aa  182  8.000000000000001e-45  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
533 aa  182  8.000000000000001e-45  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  38.07 
 
 
490 aa  182  9.000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  38.07 
 
 
490 aa  182  9.000000000000001e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
531 aa  182  1e-44  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  41.84 
 
 
647 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
411 aa  182  1e-44  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  38.85 
 
 
634 aa  182  1e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
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